Gene Sama_1648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1648 
Symbol 
ID4603899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2013490 
End bp2013834 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content52% 
IMG OID639781011 
Producthypothetical protein 
Protein accessionYP_927524 
Protein GI119774784 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1393] Arsenate reductase and related proteins, glutaredoxin family 
TIGRFAM ID[TIGR01617] transcriptional regulator, Spx/MgsR family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.77619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACTCT TTGGCATTAA AAATTGCGAC ACCGTGAAAA AGGCCCGCAA GTGGCTGGAA 
GCCAATGGCC ATAACGTCCC TTTCCATGAT TTTCGTGTTG ACGGTCTACC GGCCGAGCAG
CTGAATGACT GGGTTGCACG CATTGGATTT GAGCCGCTGC TCAATAAAAA ATCCACCAGT
TTTCGCGCAC TGACTGACGA GCAAAAGCAG GACATAGACA CAGCCAAGGC CATTGCGCTG
ATGCTGGAGT ACCCCACACT CATCAAGAGG CCGGTGCTGG TAAAAGGCGA CACCGTGTAC
ACAGGCTTTA ACGACAAGCT GTACAGCGAG GTATTTGGCC AATGA
 
Protein sequence
MTLFGIKNCD TVKKARKWLE ANGHNVPFHD FRVDGLPAEQ LNDWVARIGF EPLLNKKSTS 
FRALTDEQKQ DIDTAKAIAL MLEYPTLIKR PVLVKGDTVY TGFNDKLYSE VFGQ