| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1646 |
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| Symbol | |
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| ID | 4603897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2011653 |
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| End bp | 2012291 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781009 |
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| Product | D-alanyl-D-alanine carboxypeptidase-related protein |
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| Protein accession | YP_927522 |
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| Protein GI | 119774782 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1876] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.806668 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCCG CCGCCGCAAA GGCCTTTGCG GCCATGCAGC ATCAGGCTGC CAAGGCGGGC
ATTAAGCTTG CCGTGACCTC AGGTTATCGC TCCTTCGAGC GCCAACTGGC TATCTGGAAT
GCCAAGGCTA CGGGCAAACG CCCGCTGCTG GATGCAAAAG GCCAGCCCCT TGATGGGAGC
TCGCTGGATG CTGATAAGCT AATAGACACC ATACTGCTGT GGTCAGCGCT GCCGGGGTGC
TCACGTCACC ACTGGGGAAC AGATCTGGAT GTGTTTGACG CCGCCCGGAT AGAAAAGGAT
GCGCTCAAAC TGGAGGCCTG GGAATATGCC AAAGATGGCC CCTGCCACGC CCTCGCGAAC
TGGCTCATTG AGAGTGGTGA AGCGTTTGGC TTCTTCCTGC CCTATCAGGC CGGCAAAAGT
GGCGTCAGCC CCGAACCCTG GCATATCAGC TTTGCCCCGG CTGCCCAATT TGCCATCAAT
CAGTTTGATA CCAATCTGCT TAGGTCCGTG ATTGCTGCCA GTGATATGGC GCTTAAAGAT
ACAGTGCTGT TGCGACTGGA CACCTTGGTA GAGCGTTATG TGAGACACTT TGCCGCGCCC
TCTTTTACCT TTGACGAGTT GGATTTACGT CATGAATGA
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| Protein sequence | MHPAAAKAFA AMQHQAAKAG IKLAVTSGYR SFERQLAIWN AKATGKRPLL DAKGQPLDGS
SLDADKLIDT ILLWSALPGC SRHHWGTDLD VFDAARIEKD ALKLEAWEYA KDGPCHALAN
WLIESGEAFG FFLPYQAGKS GVSPEPWHIS FAPAAQFAIN QFDTNLLRSV IAASDMALKD
TVLLRLDTLV ERYVRHFAAP SFTFDELDLR HE
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