| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1631 |
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| Symbol | |
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| ID | 4603883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1995924 |
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| End bp | 1997417 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780995 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_927508 |
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| Protein GI | 119774768 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.104747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.519419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTTA GATATGGTGT TGACCATCTC ACTCTCGAAA CCGTAAACGG CATTGCCAAC
GGCAGTATTC AGGCAGAGCT GTGCCAGCAA GCCATCGACA AGATCAACGC CAGCCGCCAT
AACGTGGATG TGATGGCCGC ATCCGACAAG GCCATTTACG GCATTAACAC CGGCTTTGGC
CCCCTGTGCG ATACCCAGAT TTCCCCTGCC GAAACCCACC TGCTGCAAAA GAACCTGCTG
ATCACCCACG CCGTGGGCGT AGGTGAACCG ATTGCCAAAT CCATCTCCAA GCTGATGCTT
ATCACCAAGG TGCATGCACT CAGTCAGGGC TTTTCGGGTA TTCGTCTCGA CGTGGTTGAG
CGTATGTTGG CCTTTATCGC CCTTGACTTG ATCCCTGTGG TACCGGAGCA GGGCTCTGTG
GGCGCATCCG GCGATTTGGC GCCGCTGTCG CATCTGTTTT TGCCGCTGCT CGGCGAAGGT
GAATTCTGGC AGGGCGATAA GATAGTGCCT GCCCGTGAGG CGCTTAAGGC CCATGGCCTT
GAGCCGCTTG AACTGCACGC CAAAGAAGGC CTGGCGCTGA TTAACGGTAC CCAGTTTATT
TTGTCCCACG CCATCACAGC GCTGACCAAG ATGGGCTATT TGCTGGATTT GGCCGACCTG
GCCGGAGCCA TGAGCATTGA AGGCATGCAG GGTAGCCAGT CGCCGTTTCG CGCCGAGCTG
CACGAAATCC GCCCCTTCGC CGGTAACATC GAAGTGGCCG CCCGTATGCG CAGCTTCTTC
AAAGACTCTG AGAACATGGC TTCTCACGAA GATTGCGATC GGGTGCAGGA CCCATACTCG
TTGCGCTGTA TCCCGCAGGT TCACGGCGCC TCGCGTAACG CTTACAACCA TTTGAAAGAG
CTGGCCGAAA TTGAAATGAA CTCGGTCACC GACAACCCGA TTGTCATCAG TGCAGAAGAG
GCCATTTCCG GCGGTGGTTT CCATGGTCAG CCACTGGCCA TGGTACTGGA TTACACCTCC
ATTGCTGCGG CTGAGCTGGG TAACATTTCA GACCGCCGCT GCTATTTGCT GCTCGAAGGC
CTGCATGGGT TGCCGCGTCT GCTCACCACC TCGGGTGGTC TTAACTCTGG CATGATGATC
CCTCAGTACG TGACCGCAGC GCTGGTTACC GAAAACAAGT CCCTGTGCTT CCCGCCGTCA
GCCGACAGCG TGCCCACCTC CATGGGGCAG GAAGACCATG TGTCCATGGG CAGTATCTCT
GGCCGTAAAC TCAACCAGAT TTTGGGTAAC CTGGAGAAAA TCTTTGCCAT TGAGCTGATG
TATGCCGCCC AAGCCATTGA TTTTCGCCGT CCCAACCGCT GCTCGGATAT TATTGAGCAA
AACCATGCTC TTATCCGCGA AAAAGTGGCC AAGCTGGAAG AGGACCGCCT GCTCAAGCCC
GATATTGATG CCATTATTGC GCTGGTCAAG GCTCAGGCCT TTACCGTGAA GTAA
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| Protein sequence | MRFRYGVDHL TLETVNGIAN GSIQAELCQQ AIDKINASRH NVDVMAASDK AIYGINTGFG
PLCDTQISPA ETHLLQKNLL ITHAVGVGEP IAKSISKLML ITKVHALSQG FSGIRLDVVE
RMLAFIALDL IPVVPEQGSV GASGDLAPLS HLFLPLLGEG EFWQGDKIVP AREALKAHGL
EPLELHAKEG LALINGTQFI LSHAITALTK MGYLLDLADL AGAMSIEGMQ GSQSPFRAEL
HEIRPFAGNI EVAARMRSFF KDSENMASHE DCDRVQDPYS LRCIPQVHGA SRNAYNHLKE
LAEIEMNSVT DNPIVISAEE AISGGGFHGQ PLAMVLDYTS IAAAELGNIS DRRCYLLLEG
LHGLPRLLTT SGGLNSGMMI PQYVTAALVT ENKSLCFPPS ADSVPTSMGQ EDHVSMGSIS
GRKLNQILGN LEKIFAIELM YAAQAIDFRR PNRCSDIIEQ NHALIREKVA KLEEDRLLKP
DIDAIIALVK AQAFTVK
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