| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1626 |
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| Symbol | astD |
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| ID | 4603878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1990345 |
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| End bp | 1991832 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780990 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | YP_927503 |
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| Protein GI | 119774763 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.323161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCAG TGATCAATAA TCCGTCAAGC TGTCAGTTTA TTGGTGGACA GTGGCAACCC
GGCCACGGTA AAGGCTTTGA GTCGATTAAT CCGGCCAATG GAGAGGTTAT CTGGTGTGGT
AACGGCGCCA ATGCCGAGCA GGTCGATACC GCCGTTAAGG CCGCCCGCAG CGCCTTTTAC
AACTGGTCAG CCATGCCCCT GGCCGAGCGT TTGGCCATTA TTGAAGCCTT TGGCGCTCAA
CTTGGTGAAC ACAGCGAAGC CATGGCACGC CTCATTGCTG AAGAAACCGG CAAGGCACTG
TGGGAGAGCC GCACCGAAGT TGCGGCCATG ACTGGCAAAA TCGCGATATC CATCAGAGCC
CACAGCGAAC GCACCGGCAC AGTGGAAAAC CCCATGCCCG GTGCCCGTGC TTTTATCCGC
CATAAGCCCC ACGGCGTGGT GGCGGTATTT GGGCCTTATA ACTTCCCGGG GCACCTGCCT
AACGGCCATA TAGTGCCTGC GCTGATCGCC GGGAACACTG TACTGTTCAA ACCCTCGGAG
CTGACCCCTA AAGTGGCCCA GTTTACGGTG GAGCTGTGGC AAAAAGCAGG CTTGCCCGCA
GGTGTGATTA ACCTGCTGCA AGGCGAAGTG GAAACCGGCA AAGCGCTCGC TGGGCACCCC
GGCATCGACG GGCTCTTCTT TACCGGCAGC TCCAACACGG GTCATTTGCT GCATCAGCAG
TATGCCGGTC AGCCGGGAAA AATTTTGGCG CTGGAAATGG GCGGAAATAA CCCGCTCATC
GTCAAAGATG TGGCCAATGT GAATGCCGCT GTACATGACA TCATCCAATC GGCCTTTATC
TCCAGCGGTC AGCGCTGCAC CTGCGCCAGA CGTCTTTTCA TTAAGAAAGA CGCCAATGGC
GATGCCATCC TGGCCAAGCT GATTGAGGCC AGCCGTCAAA TTCGCGTAGA TGAACCCTTT
GCCGAAAACC AACCCTTTTA TGGTGCCATG ATCAGCGCCA AAGCGGCGGC GGCCATGGTG
AAGGCGCAAA CCGATATCCA GTCTCTTGGC GGCATTTCAC TGCTGGAGCT TAAGCAACCT
GACCTTGCCC TTGGCTTCGT CACGCCCGGT ATTATTGATG TCACCCACGT CAAAGCCCTG
CCGGACGAAG AACACTTTGG TCCGCTGCTC AAGGTCTACC GCTACGATGA CTTCGATGCC
GCCATTGACG AAGCCAATAA CACTGCGTTT GGCCTGTCGG CTGGATTGCT GGCCGATAAT
GAAGCGGATT ATGACCACTT CTTCCGCCGC ATTCGCGCAG GAATCGTGAA TTGGAACAAA
CCCATTACAG GTGCCTCCAG TGCCGCGCCA TTTGGCGGCA TTGGCGCCAG CGGTAACCAC
AGGGCCAGCG CCTTCTACGC GGCCGATTAC TGCGCCTACC CCGTCTCCTC AGTGGAAGCC
AGCAGCGTCA GCCTGCCTGC CAGTCTGAGC CCGGGCCTCA GTATTTAA
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| Protein sequence | MSSVINNPSS CQFIGGQWQP GHGKGFESIN PANGEVIWCG NGANAEQVDT AVKAARSAFY
NWSAMPLAER LAIIEAFGAQ LGEHSEAMAR LIAEETGKAL WESRTEVAAM TGKIAISIRA
HSERTGTVEN PMPGARAFIR HKPHGVVAVF GPYNFPGHLP NGHIVPALIA GNTVLFKPSE
LTPKVAQFTV ELWQKAGLPA GVINLLQGEV ETGKALAGHP GIDGLFFTGS SNTGHLLHQQ
YAGQPGKILA LEMGGNNPLI VKDVANVNAA VHDIIQSAFI SSGQRCTCAR RLFIKKDANG
DAILAKLIEA SRQIRVDEPF AENQPFYGAM ISAKAAAAMV KAQTDIQSLG GISLLELKQP
DLALGFVTPG IIDVTHVKAL PDEEHFGPLL KVYRYDDFDA AIDEANNTAF GLSAGLLADN
EADYDHFFRR IRAGIVNWNK PITGASSAAP FGGIGASGNH RASAFYAADY CAYPVSSVEA
SSVSLPASLS PGLSI
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