Gene Sama_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1625 
Symbol 
ID4603877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1989511 
End bp1990314 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content54% 
IMG OID639780989 
Producthypothetical protein 
Protein accessionYP_927502 
Protein GI119774762 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.542043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.294024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCC AGATTAATGA ACTCTTCTCC AACCTTTGGC AGGACTATGT GTCAGTAACG 
CCCTCTGCAC AGAAAATTCA TGCCCTGCTT GGCTCGACTC AGCAGGATGA CGTGCAAAAC
GACCATATCG CCCTGCGTAC CTTTAATATC GAGAAGATTA ACCTGGAAAA ACTGGCCGCC
CATTTTCTGG CCCTGGGCTA TGTAGAGAGC GGCGAATACC ACTTCGAAGC CAAAAAGCTC
TATGCCAAGC ACTTCGAGCA CCCGGATGCC ACTCAGCCCA AGGTGTTTAT CTCTGAGCTG
CTGTTGGAAA AATGCTCTCC TGAGCTGCAG GCCACAGTGC ACAAGCTGGT CGAGCAAATC
GATGCGGCCG CCGTGACTGC CGATAACTTC CTCTACTCAG GTCGTCACTG GAGCATCGAC
CAGGCCACCT ACGAAACTCT GCTCAAGGAA AGCGAGTACG CCGCCTGGGT TTCTGTGTGG
GGATTTCGCG CCAACCACTT CACCGTATCG GTAAATGCGC TGAAAAACTA CGAAACCCTG
GCCTCCGTGA ATGATGCCCT CAAGGCCGCA GGTTTTGCAC TCAACACCTC CGGCGGTGAA
ATCAAGGGCA GCGAAGAGGT GAAGCTCAAG CAGTCTTCGA CCCTCGCCGA CGAAGCCGTG
GTGGAATTCA CTGATGGCAA GCGTATGGTG CCAAGCTGTT TTTATGAGTT TGCCCGCCGC
TTCCCATTAG AAGATGGCCG CCTGTACCCA GGCTTTGTGG CTGCCTCCGC TGACAAGATT
TTTGAGAGCA CCAACGCCCG TTAA
 
Protein sequence
MHTQINELFS NLWQDYVSVT PSAQKIHALL GSTQQDDVQN DHIALRTFNI EKINLEKLAA 
HFLALGYVES GEYHFEAKKL YAKHFEHPDA TQPKVFISEL LLEKCSPELQ ATVHKLVEQI
DAAAVTADNF LYSGRHWSID QATYETLLKE SEYAAWVSVW GFRANHFTVS VNALKNYETL
ASVNDALKAA GFALNTSGGE IKGSEEVKLK QSSTLADEAV VEFTDGKRMV PSCFYEFARR
FPLEDGRLYP GFVAASADKI FESTNAR