Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1625 |
Symbol | |
ID | 4603877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1989511 |
End bp | 1990314 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639780989 |
Product | hypothetical protein |
Protein accession | YP_927502 |
Protein GI | 119774762 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.542043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.294024 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACACCC AGATTAATGA ACTCTTCTCC AACCTTTGGC AGGACTATGT GTCAGTAACG CCCTCTGCAC AGAAAATTCA TGCCCTGCTT GGCTCGACTC AGCAGGATGA CGTGCAAAAC GACCATATCG CCCTGCGTAC CTTTAATATC GAGAAGATTA ACCTGGAAAA ACTGGCCGCC CATTTTCTGG CCCTGGGCTA TGTAGAGAGC GGCGAATACC ACTTCGAAGC CAAAAAGCTC TATGCCAAGC ACTTCGAGCA CCCGGATGCC ACTCAGCCCA AGGTGTTTAT CTCTGAGCTG CTGTTGGAAA AATGCTCTCC TGAGCTGCAG GCCACAGTGC ACAAGCTGGT CGAGCAAATC GATGCGGCCG CCGTGACTGC CGATAACTTC CTCTACTCAG GTCGTCACTG GAGCATCGAC CAGGCCACCT ACGAAACTCT GCTCAAGGAA AGCGAGTACG CCGCCTGGGT TTCTGTGTGG GGATTTCGCG CCAACCACTT CACCGTATCG GTAAATGCGC TGAAAAACTA CGAAACCCTG GCCTCCGTGA ATGATGCCCT CAAGGCCGCA GGTTTTGCAC TCAACACCTC CGGCGGTGAA ATCAAGGGCA GCGAAGAGGT GAAGCTCAAG CAGTCTTCGA CCCTCGCCGA CGAAGCCGTG GTGGAATTCA CTGATGGCAA GCGTATGGTG CCAAGCTGTT TTTATGAGTT TGCCCGCCGC TTCCCATTAG AAGATGGCCG CCTGTACCCA GGCTTTGTGG CTGCCTCCGC TGACAAGATT TTTGAGAGCA CCAACGCCCG TTAA
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Protein sequence | MHTQINELFS NLWQDYVSVT PSAQKIHALL GSTQQDDVQN DHIALRTFNI EKINLEKLAA HFLALGYVES GEYHFEAKKL YAKHFEHPDA TQPKVFISEL LLEKCSPELQ ATVHKLVEQI DAAAVTADNF LYSGRHWSID QATYETLLKE SEYAAWVSVW GFRANHFTVS VNALKNYETL ASVNDALKAA GFALNTSGGE IKGSEEVKLK QSSTLADEAV VEFTDGKRMV PSCFYEFARR FPLEDGRLYP GFVAASADKI FESTNAR
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