| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1616 |
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| Symbol | |
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| ID | 4603868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1977395 |
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| End bp | 1979233 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780980 |
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| Product | hypothetical protein |
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| Protein accession | YP_927493 |
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| Protein GI | 119774753 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.254318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGTGA AATTTTTATA TCCTCTGACA GCCGCAGCCC TGTTTGGCGC CCTGCCTGTC
AGTGCAGCAA ACGATCCTTT ACTGCGGATA AATGTCAGCG GCGTAGATGA AGCGCTCGAA
AAAAATATCC GTGCACACCT GGGTTCCCTG CCGGAGTCCG AGGTACAAAG GCGTGCCTTC
CTGTTTAATG TGCAGGACAG CGTTGACGCT GCTCTGCAAT CAGTGGGCTA TTACCACGGT
GAGCTCAACC AAAACCTCAT TCGCCATGAT AAAGGTCCGT GGGAGCTGAC ACTGACTGTC
TCTCCCGGTG AGCCAACCCG TATCGATTGG GTGGACATCC GCTTTGCCGG TGAAATGCTG
AATGACGCCG CCTTTGACAC CTGGCTTGAT GGCGTCAGCC TGAGGCCGGG TCAGGTGCTC
AATCACGGCA ACTATGAAAA TCTTAAAGCC GAGCTTGGCG CCATCGCGCT GTCCCGGGGC
TACTTTGATG GCAAATACAC CAAGGCAGAA ATCCGGGTAA ACCGCGATGA GAATCGCGCT
ACCATCAGCC TGCATTTTGA TTCCAGCGCC CGATATCGCC TTGGCGATGT CAGCTTTGAG
GGCCACACCC TGGATGAGGG CTTTCTGGAT AGACTCATTC CCTTTGAGCA CCAAAGCCCT
TATGCAACCC GTCGGCTGTC GGCGCTGAAC AGCCGCTTGC AGGAGACCGG TTATTTTCGC
TCAACCAAGG TATTGCCACA GCTTGATAAG GCCGAGAACG GGGAAATTCC CATTAAAGTT
GAACTGGATA ATCGTCCGGA TCATTCCATC GAGCTGGGTT TGGGTGGCGA TATAGGCTCG
AGCAGCGACA GTACCTTCGA GCCCAGGGTC AGGGTGACCT GGCGCACGCC ACAAATTAAC
AGCCACGGCC ACTCTCAGGA AACCAGTATC GAGTGGTCGC CCGACCGTCC CAAATTTTTA
ACCACCTATA CCATTCCCCT CACCCATCCG CTGGACGATC AATTAAAACT GAGACTCGGT
CTGCTGCGGG ATAAATACGG CGTGACCCAG GTATATGAAC CCGAAGATCT GGATTTCAGA
AACACAGGTC AGTTGGAGTC CAGCAAGCAA TTGCTGGGGG TACTCAGGCA GCAGTCTCTG
GGCGATGGCT GGTTGATGGG GTATTCGCTG GACTTTATCC GCGAGAGCTA CACCCAGTTT
GATACCGATT ATTCCCCGTC TTTCCTGCTG GCCGGATTTA GTCTGTCCAA TACGGTCAGG
GGGGATGCGA CACTCGACCC CAAGTGGGGT TACCGTCAGT CTTACAGTGT TGACTATGCC
GACCCCAGCC TGGGCTCCGC CACGCGTTTA AGCCGCTTTC AAGCCAAATT CAAATGGATT
GACACCTTCT TTACCAAGCA TCGCCTCGTC GCCAGAGCCG ATTTTGGTCT GAACCTGGTG
AGCGATGGCG ATCTGGCACT GGTGCCACCG TCCCTGAGGT ATTTCACCGG CGGCGATCAG
AGTATTCGCG GTTATGCATT TCAGGAAATT GGTCCCTATA TCGAGTTCAC CAATGATGAT
GGGCAAATCG CCCGTGAAGT CATAGGTGGT CGCTACCTCG CAGTCGGCAG CCTGGAATAT
CAATATTATC TGACGCCATC GTGGCGTTTG GGCTCCTTTG TTGATGCCGG TAACGCGTTT
GATAAGGACA AGTTTGAACC CGTGGTATCG GTTGGTGGCG GCGTACACTG GATTTCCCCC
ATAGGCCCAA TCAAACTCGA TTTGGGCGTA GGCCTGACCG AGACAGATAC GCTGGAGCGC
TCGTGGCGTA TACACCTGAC TATGGGAAGC GAACTATGA
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| Protein sequence | MKVKFLYPLT AAALFGALPV SAANDPLLRI NVSGVDEALE KNIRAHLGSL PESEVQRRAF
LFNVQDSVDA ALQSVGYYHG ELNQNLIRHD KGPWELTLTV SPGEPTRIDW VDIRFAGEML
NDAAFDTWLD GVSLRPGQVL NHGNYENLKA ELGAIALSRG YFDGKYTKAE IRVNRDENRA
TISLHFDSSA RYRLGDVSFE GHTLDEGFLD RLIPFEHQSP YATRRLSALN SRLQETGYFR
STKVLPQLDK AENGEIPIKV ELDNRPDHSI ELGLGGDIGS SSDSTFEPRV RVTWRTPQIN
SHGHSQETSI EWSPDRPKFL TTYTIPLTHP LDDQLKLRLG LLRDKYGVTQ VYEPEDLDFR
NTGQLESSKQ LLGVLRQQSL GDGWLMGYSL DFIRESYTQF DTDYSPSFLL AGFSLSNTVR
GDATLDPKWG YRQSYSVDYA DPSLGSATRL SRFQAKFKWI DTFFTKHRLV ARADFGLNLV
SDGDLALVPP SLRYFTGGDQ SIRGYAFQEI GPYIEFTNDD GQIAREVIGG RYLAVGSLEY
QYYLTPSWRL GSFVDAGNAF DKDKFEPVVS VGGGVHWISP IGPIKLDLGV GLTETDTLER
SWRIHLTMGS EL
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