| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1615 |
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| Symbol | |
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| ID | 4603867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1973505 |
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| End bp | 1977398 |
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| Gene Length | 3894 bp |
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| Protein Length | 1297 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780979 |
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| Product | hypothetical protein |
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| Protein accession | YP_927492 |
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| Protein GI | 119774752 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.354502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGG ATATGAATCA AACCACGCCG TCAATGGGTT CTGACTCCCC AAACACGCCC
AAGCCGGTAA CAAAGGTATT GCCTTGGTAC CACCCCTGGC CGCTGTTCAA GCTTGTTACC
CGATTGGTTG TTTATATCCC GCTGCTCTTC CTTGTGCTGC TGGCGTTGGT GCTGGGTACC
CCCTTTGGTG CGCGTATCGC GGTAAGTCTT GCCGCAAGTC TGGTGCCCAA TTTCAGCGCC
AGCTATGTCA GCGGCACTAT TAACCGTGAC CTGGCTTTGA GTGATATACG CTGGTCCATG
GATGGAATTG CCGTTGAAGG CAAAGCGCTG CTGGTGGAAT GGCAGCCATC CTGCCTGCTT
GCCAAAGGCC TGTGTGTGCA AAATCTGTCG CTCGACGGCT TAGCCCTGGT AATAGAAACT
GACAAACTCC CCAAAGGTGA AAGCGAGCCC GCACCCGCGA CTGAAAAGCT GATTTTGCCC
TTCAGTATCT CCCTGGATAA GGCGCAATTA ACGTCAGTCG ATGTACGCGT CGATACCATG
AAATTTGGTG CCGATTACCT GATGGCGGCT GCCAAGTGGC AGGAGGATGG GCTAAAAGTC
GACGAGCTAC AAAGCCGTGG CTTACAGGTG TTCATTCCCA TACCGGGCGA GGCAGATACC
GGGGCTCAAG GCAGTACCAT CACGTCCGAT AACACTGCCA TGGACAGCGC AGCGCCGACA
GAAGGAAGCT GGCCCCTTGC CAGCTTGCCG ACCATCGCCT TGCCCATGAA CCTGCAATTG
CTGAAAGCTG ATCTGACTGA CACTCACCTT GCCATTCTTG GTGAGGACGA AGTGATAAGT
CGCCTGCTGC TGGGAGCGGA TTTCGAAGGC AGTGCACTTA CGCTGCAGGA GCTTAAGCTC
GAACACCCTG AAGCCGAGTT GGAGTTGAAA GGTACTGTGG ATTTGTCTGC GGACTATCCC
ATGGCACTTA AGCTCAATGT CAACACCCAC TCGCCGTCAC GTTTTCCCGA TATCGGCGAG
CAACAATTGC AACTCGACGT CAACGGCAAC CTGTCACAGC TCACCCTGAA GGTGCAGGCT
AAGGGTACCC TGAATTTTGA GCTGGATGCC GGGGCGGCCC TGACAAATCC TGAAGTGCCC
TTTACGCTTA CCCTGAGCAA GGCAAATGTG GGTTGGCCGC TGCAGGCGCC AGAATACCAG
GGTCAGGAGC TCTCGGTAGT GGCAAGCGGT AACCTGAATG CCCAGCAGGC GAGTATCAAT
GGCAATGTCA TTACCCCGTT TCATACCCCG CTTTTGCTTA ACGCCGTACT CAGTCATCAG
GCGCAGTCTC TTGAAATAAC GGAAGCCGCA GTGTCTGGTG AGCCTGGAAA TATTCATCTC
AGTGGCACAC TGAATTATGC CGACGGCCTG GACTGGCGAG CGGGTGTCAG CTTTGACAAG
CTCACACCCT CTGCCCTTGT GCTGCCGGAA GGCGTGACCT TACCCAAGGG CAGCCTTGAT
GGCGCCTTTG AAACCAGTGG CACCTTTGAA ACACGCGGCA CAGTCAAAAA CCAGTGGCAA
ATCAGCCTTT CCCAAGCGGA TATTCACGGC GAACTGGCGG GTTTTCCAGT CACCCTGACG
GGCGATGTAA CAGTTAATGA GAAACTGCAC CTCAGTGCAC AGGACTTTTT ATTAACTGCC
ATGGGCGCCA AACTGACCCT TAACGGCAAT GTTGAAGACG ACTGGGATCT GCAAGGCCTT
ATTCTGGCTC CAGATTTATC GCTTCTGGCC GAAGGTCTGA ACGGCAAGTT TATGGCCAAT
CTGGATGTTA GCGGTAGCAA CAAAGATCCT TTGGTGAACC TGCAAGCCCA GGGCGAAGCA
ATTAAATTTG GTACAACCCA GCTTGAGTCA CTCGCGATAA AGGGCTTGTA CCAACCGTTC
GCCAAGCATG AATTTGCCCT GTCGCTGAAA GGGAGTGCCT TACAGCTTGG CAGTCGCAAA
CTTGAGTCGG TTACCCTGGG TGCCAAGGGC GATATCAACA AACAAAAACT GCGGGCAGAA
AGCTTTGGCG ATATCCGCCT CGATACTGTG GTGGAAAGCC AGTTTGATGA AAAAACGCAG
CTGATCGAGG CAAGCGTCAC CCGCTTTGAT CTCGGCAGCG AGTTTGGTGA CTGGGGCTTA
TCTCAGGATT TGCACCTGAC CTGGGAACTC GCCAGTAACA GCGGTACCCT GAACGAGGCT
TGTTTTACCC AAGGTAACAA TGCGCTTTGT CTGCCGAGAC CTGCCACACT GGGCAGTACC
GGTGATGTGG CCATCAGTTT CCGGGGAGAG CCCGGGGCCA TTATAGATAA GCTGCTGCCA
ACAAACATGG ACTGGAAAGG CAAAGCCAGC CTCGACGCCG CTGTAGATTG GAGCCCCAAA
CGCAAGCCGG CAGGTGAACT GAGCCTGGTG TTCGAGCCCG GCTCAGTCAC ACTGTTAAGA
CCCAAAGGCA AAGTAGTGGA AGTGGGCTTT GAAGCGCTGT CAGCCAAAGC CAGTCTCAGT
CCCGAAACGC TGACCGCAGA TTTGAACCTG CGCTCCTCCC GGCTCGCAAC GCTGGATAGC
CGCGTCGAAA TTGCTGTGAC ACCCGACCGG GCGCTGGGCG GATATATTCA TCTTGACCGG
ATACAACTCG AAGCGCTGAG AGAGTTTTTA CCCCAGCTGG ATACCCTCCA AGGTGAGATA
AGCAGCGAGC TCACACTGGC CGGTACCCTG ATGTCGCCTG AGGTCAGTGG CAACCTTGCG
CTGGCCAATG GGGCATTTTC CGCCAGTGCC AACCCCACTC TGATAAGCGA TGTTGACATG
CTGCTGGCTT TTGCGGGCCA ACAGGCCAGC CTCAATGGCA GCTGGGTGAT GGGCGACGGT
AAAGGGGGCA TCGAGGGCTC CCTCGCCTGG CCCGATGGTC AATTCAGTGG TGAATTGGCC
GTGAAAGGCG ACAAACTGGC GGTAATAGTG CCGCCCATGG CATTACTCGA CGTATCACCC
GATGTGACTC TTACTTTTGA TGCGGCCATG TTGGATCTCA AGGGCAGCGT CAATATTCCA
ACCGGAAACA TCAAAATAGT GCAGCTTGCA GAAGGTGGGG TCGCCGTATC CCCTGATGTG
GTATTTGATG ACTCCATTGC TGAAGCTGAA CAAAAGACCA GTCCTTACGG TGTGACGGCC
GATCTCAATA TTCGGGTTGG CGATCAGGTT AAAATTGAAG GCATGGGCCT TAAAGGCAGA
CTCGACGGTA CCCTGCGATT ACAGCAACAA GCCTTCAAAC CTCCTTTACT TTTCGGTGAC
GTAAAGGTGC TCAGTGGCAG CTACAAGTTT ATGGGTCAAA CCCTGAAGAT CCCCAAGGGG
GAAGTTCAGT TTGTCGGCCC TCCGCAGCTA CCTAACCTCA ACATTGAGGC CATTCGTGAG
ATAAAAGACG AGGACCTGAT TGCCGGTGTC AGGATCACGG GTACAGGTAT GGCGCCCGAG
GTAACCCTGT TCTCCAATCC ATCAAAAGAA CAGGCGGAGA TCCTGTCTTA CATTCTCAAA
GGTAAAGGCT TTGCCAGCAA CGGCAGCGGC GACAACAATG CGTTGATGAT GGGAGCGGCA
CTGTCGCTGA GTTCATCCCT GTCGGGGGGG GCCATTGGCA ACATTGGCAG CACGGCGACA
TCCCTTGTCG AAAAATTTGG CTTCTCCAAC GTACAGCTGG ATACCAATGA TGAAGGAAGG
GTTGCCATCA GTGGCTACAT AGGAGAAAAC CTGATGGTGA AGTATGGCGT GGGAGTGTTT
AATCCAGGCT ACGAAATGAC GGTCAGGTAC TATCTGCTGT CGCAGCTGTA TCTGGAAACT
GTGTCTGGAA CCGTTGGCCA GTCGCTGGAT ATCTATTACA GCTTCGACCT CTAG
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| Protein sequence | MSQDMNQTTP SMGSDSPNTP KPVTKVLPWY HPWPLFKLVT RLVVYIPLLF LVLLALVLGT
PFGARIAVSL AASLVPNFSA SYVSGTINRD LALSDIRWSM DGIAVEGKAL LVEWQPSCLL
AKGLCVQNLS LDGLALVIET DKLPKGESEP APATEKLILP FSISLDKAQL TSVDVRVDTM
KFGADYLMAA AKWQEDGLKV DELQSRGLQV FIPIPGEADT GAQGSTITSD NTAMDSAAPT
EGSWPLASLP TIALPMNLQL LKADLTDTHL AILGEDEVIS RLLLGADFEG SALTLQELKL
EHPEAELELK GTVDLSADYP MALKLNVNTH SPSRFPDIGE QQLQLDVNGN LSQLTLKVQA
KGTLNFELDA GAALTNPEVP FTLTLSKANV GWPLQAPEYQ GQELSVVASG NLNAQQASIN
GNVITPFHTP LLLNAVLSHQ AQSLEITEAA VSGEPGNIHL SGTLNYADGL DWRAGVSFDK
LTPSALVLPE GVTLPKGSLD GAFETSGTFE TRGTVKNQWQ ISLSQADIHG ELAGFPVTLT
GDVTVNEKLH LSAQDFLLTA MGAKLTLNGN VEDDWDLQGL ILAPDLSLLA EGLNGKFMAN
LDVSGSNKDP LVNLQAQGEA IKFGTTQLES LAIKGLYQPF AKHEFALSLK GSALQLGSRK
LESVTLGAKG DINKQKLRAE SFGDIRLDTV VESQFDEKTQ LIEASVTRFD LGSEFGDWGL
SQDLHLTWEL ASNSGTLNEA CFTQGNNALC LPRPATLGST GDVAISFRGE PGAIIDKLLP
TNMDWKGKAS LDAAVDWSPK RKPAGELSLV FEPGSVTLLR PKGKVVEVGF EALSAKASLS
PETLTADLNL RSSRLATLDS RVEIAVTPDR ALGGYIHLDR IQLEALREFL PQLDTLQGEI
SSELTLAGTL MSPEVSGNLA LANGAFSASA NPTLISDVDM LLAFAGQQAS LNGSWVMGDG
KGGIEGSLAW PDGQFSGELA VKGDKLAVIV PPMALLDVSP DVTLTFDAAM LDLKGSVNIP
TGNIKIVQLA EGGVAVSPDV VFDDSIAEAE QKTSPYGVTA DLNIRVGDQV KIEGMGLKGR
LDGTLRLQQQ AFKPPLLFGD VKVLSGSYKF MGQTLKIPKG EVQFVGPPQL PNLNIEAIRE
IKDEDLIAGV RITGTGMAPE VTLFSNPSKE QAEILSYILK GKGFASNGSG DNNALMMGAA
LSLSSSLSGG AIGNIGSTAT SLVEKFGFSN VQLDTNDEGR VAISGYIGEN LMVKYGVGVF
NPGYEMTVRY YLLSQLYLET VSGTVGQSLD IYYSFDL
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