Gene Sama_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1614 
Symbol 
ID4603866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1973022 
End bp1973309 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content50% 
IMG OID639780978 
Product50S ribosomal protein L25 
Protein accessionYP_927491 
Protein GI119774751 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.47742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.869022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTACA CAATTCCTGC ACAAACCCGC ACTGAGATCG GGAAAGGTTC GAGCCGCCGC 
CTGCGTCGTG AGGGTAAAGT TCCTGCTGTT ATCTACGGTG TTGGCAAAGA GCCAGTATCC
ATCGTTTTTG ACCACAAGGA CATCATCAAC ATCCAGGCCA ACGATGATTT CTACACCAGC
GTTCTGACCA TCGTTCTGGA CGGCAAAGAA GTAAACGTAC GCGCTCAGGC TATGCAGCGT
CACGTGTTCA AGCCAATGAT TGACCACGTA GACTTCGTTT ACGCTTAA
 
Protein sequence
MSYTIPAQTR TEIGKGSSRR LRREGKVPAV IYGVGKEPVS IVFDHKDIIN IQANDDFYTS 
VLTIVLDGKE VNVRAQAMQR HVFKPMIDHV DFVYA