Gene Sama_1611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1611 
Symbol 
ID4603863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1969782 
End bp1970057 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content54% 
IMG OID639780975 
ProductHU family DNA-binding protein 
Protein accessionYP_927488 
Protein GI119774748 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0329603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAG CCACACTGAC AAAGTTCATC GCCAACACCA CAGGCGTCAG CCAACCCGAA 
GCCAAACGCC AGCTTGAGCA AATTCTGGCA TCGATTCGTC AAGCTCTGGA AGAAGGAGAA
ACCCTCTATC TGCCTCAGTT CGGCACCTTC GAACTGCGCT ACCACCTGCC CCGTCAGGTA
CGCAACCCCA AGACAGGGGA ATTGATGGAG GTCGCTGGGT TCAACCAACC AAGTTTTAAA
CCTGCGCCAG CTCTTAAGCA GCTAATCGCG GGCTGA
 
Protein sequence
MNKATLTKFI ANTTGVSQPE AKRQLEQILA SIRQALEEGE TLYLPQFGTF ELRYHLPRQV 
RNPKTGELME VAGFNQPSFK PAPALKQLIA G