| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1598 |
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| Symbol | |
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| ID | 4603850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1952011 |
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| End bp | 1952700 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639780954 |
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| Product | putative oxidoreductase protein |
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| Protein accession | YP_927475 |
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| Protein GI | 119774735 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.299801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAGG TCGTCATCAC AGGGGCAAAT CGAGGTATTG GTCTTGCGTT GACCCAACTC
TATTTGGATG CAGACTGTGA TGTGGCGGCG TGCTGCCGAC ACCCGGAAGA AGCAAATGCG
CTGCATGCCT TGATGGATAA GCACGAAGGG CTGGAACTCT TTGAGCTCGA CGTGAGTTCA
AGTGATGCGA TTGCCTCTCT GGGAGAGGCG CTTAAAGGTC GCCCCATCCA CCGATTAATC
AATAATGCCG GTTATTACGG CCCCAAAGGC GTTAGCCTGG GTAATTCACC TGAAGATGAA
TGGCAGGCGA TGTTTTCCAT TAACTGCATT GGACCGCTCA AGTTGGTTGA ATCGTTAACC
GAGGGGTTAT GCCAAGGGCA GGGCATTATT GCCAATCTGA GCTCAAAGAT GGGCAGTATG
GCAGACAACA GCAGTGGTGG GGCTTATCTG TATCGCTCGG TCAAAGCCGC CCAAAACGCG
GTCACCAAGT CTCTTGCAAT TGATTTGGCG CCTTACGGGG TAAAAGCGGT AGCTTTGCAC
CCGGGGTGGG TTAAAACTGC CATGGGTGGA CCAAATGCCC TGATTGATAC TCAAACCTCT
GCAGCGGGCT TATACAGGGT GATTGAAGGG TTGACCTCTG CCCAAAGTGG TGGATTTTTT
GATTATCAGG GAAACATTAT TCCGTGGTAA
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| Protein sequence | MTQVVITGAN RGIGLALTQL YLDADCDVAA CCRHPEEANA LHALMDKHEG LELFELDVSS
SDAIASLGEA LKGRPIHRLI NNAGYYGPKG VSLGNSPEDE WQAMFSINCI GPLKLVESLT
EGLCQGQGII ANLSSKMGSM ADNSSGGAYL YRSVKAAQNA VTKSLAIDLA PYGVKAVALH
PGWVKTAMGG PNALIDTQTS AAGLYRVIEG LTSAQSGGFF DYQGNIIPW
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