Gene Sama_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1587 
Symbol 
ID4603839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1932953 
End bp1933222 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content44% 
IMG OID639780943 
Producthypothetical protein 
Protein accessionYP_927464 
Protein GI119774724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00606067 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGGTATG GGGTCAAGGT GGCTCAGCCC CTTCATATTC GGAGTGCGAA ATTGGAACTC 
TTTTTTCGAC TTAATGTCGG CTTTAATGAT TTTTTAAAAT ACTATCAAGG TGATGCAACC
ATGGTTGAAG TTAAAGACAT TGAGGGCAGG GTACTTTGGA TCAACGCCAG GCATTTTCGT
CCCTATGTTA CCCGCGACGG GATACAGGGA CTTTTCCGCA TGGAGCTCGA TAAACAGGGC
GAATTGCAGT TGTTACAAAA ATTAGAGTAA
 
Protein sequence
MGYGVKVAQP LHIRSAKLEL FFRLNVGFND FLKYYQGDAT MVEVKDIEGR VLWINARHFR 
PYVTRDGIQG LFRMELDKQG ELQLLQKLE