| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1579 |
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| Symbol | |
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| ID | 4603831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1922416 |
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| End bp | 1925031 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780935 |
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| Product | virulence factor MCE-like protein related |
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| Protein accession | YP_927456 |
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| Protein GI | 119774716 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0624926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAATA TTGAAGCACC CAAGGTAGTC AAAAAGAAAC TGTTCTCGCC GGTTTGGCTC
CTGCCTCTGG TTGCACTTGC CCTTGCGGCC TGGCTTGGTA TCAAGAGTAT TCGGGAGTCC
GGCGTCGAAA TTTTTATTCA TTTCCCCAGC GCTTCCGGAA TCGATGTGGG CAAAACCCTG
GTCAAATATC AGGGACTGAC TGTCGGTAAG GTCACAGATA TTGCCATGGA CGAAGACCTC
AAAGGCGTCA ACGTCACAGT GATGATGGAC TATCGTTCAA CACCTTACCT GAAAGAAAAC
ACCCAATTCT GGTTGGTATC ACCCAAGGCC TCCATTACCG GGGTGTCCGG CCTCGATGCC
CTATTCTCAG GAAACTATAT CGCGGTTCAG CCAGGCGATG GCGAAAACAT GACCCGTTTT
GACGCTCTGA GAGAGGCCCC GCCATTGGCC CCCGGCAACG AAGGCATACT GGTGGAGCTC
AGCACCGACA GACTCGGTTC ATTGGATGTG GGATCGGGTG TCTATTTCAG GCAAATTCCA
GTGGGCAACG TCGTAAGCTA CCGCCTCGAA GGCAGCCAAA GAATCATCAT TGGCGCCTTT
ATTCAGGAGC AATACGCTCA CCTGGTGAAA AAAGACAGTC GTTTCTGGAA TGTCTCGGGT
ATGAGCATCG ATGCCTCCCT GAAAGGTATC AAGGTTGAAA GCGAAAGCCT CGCGACGTTG
CTTGCAGGGG GGATAAGCTT CAGCTCTTCC GATGCCGGTA TGAGCGCCAG CCACGGTGAC
AGCTTCGTGC TGCACAGCAA TGAAGTTGAT GCGCTTGGCG GTTTCTCTCT GGAACTGACA
ACAACCAATG CCGATGGCCT CAATGTGGGT AGCGTGGTCG TATATCGCGG CCTTGAAATC
GGTAAGGTCA CCGACACCAA GCTCACTGAC ACAGGCGTCA GCCTGAGTAT CTTTGTTAAT
CAGGCCCATG GTCATTTAAT CGGGAAGGAC AGTCGCTTTT GGCGTGAAGG CGCAGAGGTG
TCTCTCGGCG GGATAAAGCA TGCGGCCAGG CTTATTACAG GCGATGTGAT TGCCGTATTA
CCCGGTGACG GAGAGATGCG GGCCAGCTAT GTTCTTGAGG ACAAGGCCCC TGACTTTATG
TATGCCGACA AAGCTCATGT ACTTATTCGC AGCGACAAAG GCCAGGGTGC ACAGGTTGGT
GCCGAAATAC GCTACCGTAA TCTGCCCATC GGTGAGGTCA CTGGGGTCAA ACTCGCTGAC
GATTTGGGTT CTGTGGAGTA TCAGGCCGAC ATACAACCTG AATTCAAACG CTTGCTGACT
CAGGGTAGCT ACCTGATCAC TGAATCTCCG CTAAGCCTCG ATGCATCCCT CAAAGGGGTG
AAATTTGCTG TCGGCGATAC CTCCACCCTA CTGAATGGTG CGCTCAGGCT GGTCAGCGGC
AGCGGCGCTG CACTCTCAGA CACTGATGAA CTGCACCTCT ACGCATCAGA TGACGAGGCG
CTGGCAGCCA AGGCGCCAGC CAAGCGCATC AAGGTAAAGC TGCAAAGCAT CGAAGGCGCT
GGTATTGAGG TATCCAGCCC GGTTTATTAC AAGAAGATGC ACATAGGTGA AGTGACTCAG
GTGAAGTGGC TGCCGGATAC GGATACATTC AATATTGAAC TAGCCATCGA CAACACTTTT
AACCGTCTTA TTGGCCCCAA CACACTTTAT TGGAAACACA GTGCCATTTC TGTGGATGCC
AGTTTAAAGG GCCTTAAAGT AGACGTGGCT ACCCTGCCCG GCCTTATCAG CGGCGGCATC
GCCATTGGTC TGCTGCAACA GGGCGAGGCA AAAAATCCAG GCCATCTTTA TGAGTCTGAA
GCACTTGCAC TGGCTCAGGC ATACCCGATT GAACTTTTAA TGAGCGCAGA CTCTCGTTTG
GTCGCCGGTG CACCTATCCG CTACCAGGGA CACCAGATAG GCGAAGTCAC TGAGGTGAAG
CTGTCGTCGG ATTTAACAGA GCTGGTTGCA CACGCATACC TCTATGGCGA ATACGCCGAC
AACTTCTGCC GTGAAGACAG CCGTTATCTG CTGGAAGACG TACAGATTTC CTTGCAGGGT
ATCAAGGCAC CGGAAGCCAT ACTTACCGGG CCCTTTATCT CCGTTTTGCC GGGTAAAACA
GGGGCCCGCC TAAAGCGCTT TAACGTAACC ACCAGAGCCC CCCACTACGC CAATGTGGCT
GAAGATGCAC TCAAGTTGAC ACTCGAGCGG CCATCCCTGG GTTCACTTAA AGCCGGTAGC
CAGATCTTCT ATCGCGGTGT TGCCATCGGT GCCATCGACG GCTTTGCCCT CAACAGCAGC
GGCAGCCAGG TTGAGCTTTT TGCCCACATC AACGCCGAGT ACCGACACCT GGTCAACGCA
AGCAGCGTGT TTTTTGATCT CTCAGGGGTG AGTGTCGAGT TCGGTCTCTT CTCCGGCGCC
AAGGTGCAAA CAGGCTCACT TGAAACCATT CTGGCCGGTG GCATTGGTGT AGCCACCCGC
GCTGCAACGG CCGGCAGTAA CCAGCTTGGT AATGGCAGCC GCTTTGTGCT TTATCCCGAG
GCCCATGAAG ATTGGCTGTC CTGGGCGCCT CAATAA
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| Protein sequence | MTNIEAPKVV KKKLFSPVWL LPLVALALAA WLGIKSIRES GVEIFIHFPS ASGIDVGKTL
VKYQGLTVGK VTDIAMDEDL KGVNVTVMMD YRSTPYLKEN TQFWLVSPKA SITGVSGLDA
LFSGNYIAVQ PGDGENMTRF DALREAPPLA PGNEGILVEL STDRLGSLDV GSGVYFRQIP
VGNVVSYRLE GSQRIIIGAF IQEQYAHLVK KDSRFWNVSG MSIDASLKGI KVESESLATL
LAGGISFSSS DAGMSASHGD SFVLHSNEVD ALGGFSLELT TTNADGLNVG SVVVYRGLEI
GKVTDTKLTD TGVSLSIFVN QAHGHLIGKD SRFWREGAEV SLGGIKHAAR LITGDVIAVL
PGDGEMRASY VLEDKAPDFM YADKAHVLIR SDKGQGAQVG AEIRYRNLPI GEVTGVKLAD
DLGSVEYQAD IQPEFKRLLT QGSYLITESP LSLDASLKGV KFAVGDTSTL LNGALRLVSG
SGAALSDTDE LHLYASDDEA LAAKAPAKRI KVKLQSIEGA GIEVSSPVYY KKMHIGEVTQ
VKWLPDTDTF NIELAIDNTF NRLIGPNTLY WKHSAISVDA SLKGLKVDVA TLPGLISGGI
AIGLLQQGEA KNPGHLYESE ALALAQAYPI ELLMSADSRL VAGAPIRYQG HQIGEVTEVK
LSSDLTELVA HAYLYGEYAD NFCREDSRYL LEDVQISLQG IKAPEAILTG PFISVLPGKT
GARLKRFNVT TRAPHYANVA EDALKLTLER PSLGSLKAGS QIFYRGVAIG AIDGFALNSS
GSQVELFAHI NAEYRHLVNA SSVFFDLSGV SVEFGLFSGA KVQTGSLETI LAGGIGVATR
AATAGSNQLG NGSRFVLYPE AHEDWLSWAP Q
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