| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1568 |
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| Symbol | |
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| ID | 4603820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1912255 |
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| End bp | 1913292 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639780924 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_927445 |
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| Protein GI | 119774705 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGCG AAACCAATCC ACTGGGCCTG CTCGGCATCG AATTTACCGA GTTTGCCACC
CCAGATAACG ACTTCATGCA CAAGGTTTTT CTGGACTTTG GCTTTTCCAT GCTGAAAAAG
CACAAGGAAA AAGACATCTA CTACTACCAG CAAAACGACA TCAACTTTTT GATGAACCGT
GACCGCGCCG GTTTCTCGGC CGGTTTTGCC AAGTCTCACG GCCCGGCCAT CACCTCCATG
GGCTGGCGCG TGGAAGATGC CGAATATGCC TACAAGCACG CGGTTGAACG TGGCGCCAAG
GCCGCCCCGG ATGACGTGAA AGACCTGCCC TACCCAGCCA TTTACGGCAT TGGTGACAGC
CTGATTTACT TCATCGACCG TTTCGGTGAT GACAACATCT ACGCCACCGA TTTTGTTGAT
CTGGATGAGC CTGTGATTGT GCAGGAAAAA GGCTTTATGG AAGTCGACCA TCTGACCAAC
AACGTCTACA AGGGCACCAT GGAACAGTGG TCAAACTTCT ATAAAGACGT TTTTGGCTTT
ACCGAAGTGC GCTACTTCGA CATCAAGGGC TCCCAGACTG CACTGATTTC TTACGCGCTG
CGTTCACCGG ATGGCAGCTT CTGTATCCCT ATCAACGAAG GTAAAGGCGA CGATCGTAAC
CAGATTGACG AATACCTGCG TGAATACAAT GGCCCGGGCG TTCAGCACCT GGCGTTCCGC
AGCCGTGACA TAGTTGCCTC GCTGGATGCA ATGGAAGGCT CGTCCATTGC GACACTGGAC
ATTATCCCTG AATACTACGA CACCATCTTC GAAAAACTGC CCCAGGTGAC CGAAGACCGT
GAGCGCATCA AGCATCACCA AATTCTGGTG GATGGCGATG AAAACGGCTA CCTGCTGCAG
ATTTTCACCA AGAACCTGTT TGGTCCTATC TTTATCGAAA TCATCCAGCG TAAGAACAAC
CTGGGTTTCG GTGAAGGTAA CTTCAAGGCG CTGTTTGAAT CTATCGAGCG CGATCAGGTC
CGCCGCGGCG TGCTTTAA
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| Protein sequence | MASETNPLGL LGIEFTEFAT PDNDFMHKVF LDFGFSMLKK HKEKDIYYYQ QNDINFLMNR
DRAGFSAGFA KSHGPAITSM GWRVEDAEYA YKHAVERGAK AAPDDVKDLP YPAIYGIGDS
LIYFIDRFGD DNIYATDFVD LDEPVIVQEK GFMEVDHLTN NVYKGTMEQW SNFYKDVFGF
TEVRYFDIKG SQTALISYAL RSPDGSFCIP INEGKGDDRN QIDEYLREYN GPGVQHLAFR
SRDIVASLDA MEGSSIATLD IIPEYYDTIF EKLPQVTEDR ERIKHHQILV DGDENGYLLQ
IFTKNLFGPI FIEIIQRKNN LGFGEGNFKA LFESIERDQV RRGVL
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