| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1567 |
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| Symbol | |
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| ID | 4603819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1911454 |
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| End bp | 1912074 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780923 |
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| Product | amino acid transporter LysE |
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| Protein accession | YP_927444 |
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| Protein GI | 119774704 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGACT TCACCCTGTT AGCCGTATTT ATTCCCACCT TTTTATTTGT CTCCATCACC
CCCGGCATGT GTATGACACT GGCCATGACT CTGGGCATGA GTATTGGTGT GCGTAAAAGC
CTTTGGATGA TGGCGGGCGA ACTGGTCGGT GTGGGCCTGG TGGCACTGGC GGCCGTGCTC
GGCGTTGCCG CCATCATGCT CAACTACCCG CAACTTTTTG CTGCCCTCAA ATACGTAGGT
GGCGCTTATC TGGTCTACCT TGGCATTAAT CTGTGGCGCT CCCGCGGTAA ATTTGCGCTG
AGTAATGAGC CCGGCCCCAG CCCACATCCC ATGGCGCTTA TCAGTCAGGG CTTTTTGACC
GCCGTGGCCA ATCCCAAAGG CTGGGCCTTT ATGGTGTCAC TGCTGCCGCC TTTTATCAGT
GTAGAGCGCC CAATGGCACC CCAGTTAATG GCGCTGCTGT CCATTATTCT TATCACCGAG
TTTGCCTGTT TAATGCTGTA CGCCAGCGGC GGCAAGAGTC TTAAAGCCCT GCTGAGCCGA
GGCGACAACT TAACACTACT TAACCGAATT GCCGGTAGCC TGATGGCGTT TGTGGGTATT
TGGCTTGCCT TTGGCGACTG A
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| Protein sequence | MPDFTLLAVF IPTFLFVSIT PGMCMTLAMT LGMSIGVRKS LWMMAGELVG VGLVALAAVL
GVAAIMLNYP QLFAALKYVG GAYLVYLGIN LWRSRGKFAL SNEPGPSPHP MALISQGFLT
AVANPKGWAF MVSLLPPFIS VERPMAPQLM ALLSIILITE FACLMLYASG GKSLKALLSR
GDNLTLLNRI AGSLMAFVGI WLAFGD
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