| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1565 |
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| Symbol | |
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| ID | 4603817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1907877 |
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| End bp | 1909454 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639780921 |
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| Product | hypothetical protein |
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| Protein accession | YP_927442 |
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| Protein GI | 119774702 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01887] dipeptidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACAA TGAACATGAC AATGAAACCT GCCAATCCCT TTACTCTCAG CCGTCTGTCC
GCCCTTATTC CCTTATTGCT CACTATCCCC GGCTGGGCCG CAGCGCCTTC ACCGGATGCC
CAAAGAGTGG CCGCGTATGC GGCGTCGCAT TTCCAGCAGG CTCAAATCGA TACCTTGAAA
ACCCTGGTCG GCTACGATAC CCGTGCCCGT GACGGCCTGA CGCCGGATAC CGATCCTGTG
TTTGCCGATT TTAAGCGGGC ACTCGGGGTA AAAGCCCGGA TGCTGGGGCT TGATGTGGAG
GACAACGGCT ACGTGATGCT GATAAGCCTG TCCCCGGAAG GCGCCGGGAC AGATGTGAAA
AAGGTTGGGG TGATCACCCA CGGTGATGTG CAGCCTGCCG ACCCCAGTCT GTGGCCCCAA
AGCCCCTATG AATTGACCGA AACGGCCGAT GGCAGGTTGG TAGGCCGCGG CGCGGAAGAT
GACAAAGGGC CTATCGCTAC GGCGCTTTAT GCCATGAAAG CCATCAAAGA CAGCGGTATT
GTGCTTAAGC GGCGCATCGA GCTGCTGGTC TACATGGCTG AAGAGTCGGA CTGGGAGCCC
TTGAAGGACT TTTTGAAAAC ATATGAGCCT GCCGATATCA ATATCACCCT GGATGCCGAG
TATCCCGTGG TGACGGGGGA GAAGGGGTGG AGTCAAATCA AGCTCAGCCT GCCCCGCGTC
ATGGTGAAAG TGGGCGCAGA TACGCCGGTG CTAACATATT TCTCTGGCGG CAGCTTTGCC
AGCCAAATTC CCCAGCAGGC CAGCGCCGTG ATTCAAAACA CCAATCCTGA ACTGGTAGCC
GCGCTCAAAG CCCGAGCCAA GACGTTGCCT ATCAAGACTG ACTTCATTGA TGAGCCGCAA
GGGCTCACAA TCCATGCCAC GGGCAAGGCG GCACATTCGT CCACACCGGA AGATGGCATC
AATGCCGTGG CTTACCTCGC CGAGCTTCTC TCACCCACCG CAGATGGCGG CATCCCCGAG
TGGCCCATGA CCACGGCAGC GGTGACGGTG GATTTTTTAC ATTCGCTGGT GGGCACAGGG
CTTTATGGAG AGCGCTTTGG CAAGCTTGGC TACAGCGATG AGTTTATGGG GCCCATGACA
CTGGCACCTA CTCTTATCAC CGAGGGTAAA GAGGGGACAG ACGTGACCCT TAATCTGCGC
CGTCCGGTGG GGCGCACCCC TGAAGCGCTG GATAAGCTGG CGATTGCAGC GATTCATGGC
TGGCAGGATG CCAGGGGGAC CCAGGTGGCT GATATAGAGA CTTACTGGGG CACTCCCATG
CTGATTGACG ATGCTCCCCA TCTGGAGACG CTGCTTGGGG TGTTTGGCCA TTACACCAAC
ACAGCGGGCC CCAAACCCAT CGCCATTGGT GGCTCGACCA ATGCCAAACT CTTCCCCAAT
GCCTTAAGCT TTGGCCCAGC CATGCCCGGG ATGGAGTACA CGGGGCACAG CGAGTACGAA
TTTATCACCA GGGATCAGCT TAAGCTGAAC CTGGAAATGT ACACAGCCGC GCTGGTGGAG
TTGGCGATGC GCGAGTAA
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| Protein sequence | MPTMNMTMKP ANPFTLSRLS ALIPLLLTIP GWAAAPSPDA QRVAAYAASH FQQAQIDTLK
TLVGYDTRAR DGLTPDTDPV FADFKRALGV KARMLGLDVE DNGYVMLISL SPEGAGTDVK
KVGVITHGDV QPADPSLWPQ SPYELTETAD GRLVGRGAED DKGPIATALY AMKAIKDSGI
VLKRRIELLV YMAEESDWEP LKDFLKTYEP ADINITLDAE YPVVTGEKGW SQIKLSLPRV
MVKVGADTPV LTYFSGGSFA SQIPQQASAV IQNTNPELVA ALKARAKTLP IKTDFIDEPQ
GLTIHATGKA AHSSTPEDGI NAVAYLAELL SPTADGGIPE WPMTTAAVTV DFLHSLVGTG
LYGERFGKLG YSDEFMGPMT LAPTLITEGK EGTDVTLNLR RPVGRTPEAL DKLAIAAIHG
WQDARGTQVA DIETYWGTPM LIDDAPHLET LLGVFGHYTN TAGPKPIAIG GSTNAKLFPN
ALSFGPAMPG MEYTGHSEYE FITRDQLKLN LEMYTAALVE LAMRE
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