| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1564 |
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| Symbol | |
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| ID | 4603816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1905406 |
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| End bp | 1907598 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780920 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_927441 |
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| Protein GI | 119774701 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGAC AAACCCTCAA GCCGCTTGTT GTGGCCATGA CGCTGGCTCT GGGCCTCACG
GCCTGCGGCA ACGACGAAAA CAAACAGACC GAGGTCGCCA ATACGCCTGC TACCGTCGTT
GAAGCCACCA CCGGGGGTTC TGAGCAGGCA GCCATTACCG CAGTCAACCC CTTCTTCGAA
CCCTACAATA CCTATCAGGA CATCCCGGCC TTCGAGAAAA TCGAAGAGGC GCATTACCTG
CCTGCCTATG AAGAGGGCAT CAAGCGTCAA CAGGCTGAAA TTCAGGCGAT TATCGACAAT
CCCGACGCGC CCTCTTTCGC CAACACCATC GAAGCCATGG AGCAAAGCGG CAAACTCATC
AAACGCGTCT CTGCGGTGTT TTATAACCTG ACCTCCGCCG ACACCACCCC CGGCCTGCAG
GCAATCTCCA AGGAAGTATC GCCCATGCTG TCGTCCGCCA GAGACGATAT CTTCCTCAAC
GACAAGCTGT TTGCCCGGGT AAAAGCCGTG TATGAGCAGC GTGAAACCCT TGGGCTGAAT
ACTGCCCAAA GTCGCCTTCT GGAAGACACC TACAAGGCCT TCAGCCGCGG CGGTGCCAAC
CTTGATGAGG CCGGCAAAGC CAAGCTGCGT GAGCTGAACG AAAAAATTGG CAAGTTGAGT
CTGGAGTTTG GTGACAATGT CCTCGCCGAA ACCAACAGTT TTGAACTGGT GGTGGAAAAC
AAAGACGATT TATCCGGTCT GCCACAGAGT GTGATTGATG TGGCTGCCGC TACCGCCAAG
AGCCGTGGTA AAGAAGGCAA ATGGGTGTTC ACCACCTCAC GCCCATCCAT CACGCCGTTT
TTGACCTACG CCGACAACCG CGAACTGCGC CAGCAGCTGT ACACAGCCTA TGTTGAGCGC
GCCAATCACA ACGATGCCCG CGACAACAAA AAGGCGCTGG CCGAAATTGC CGCCCTGCGC
GCCGAGCGTG CACAGCTTCT GGGGTATAAA ACCCACGCCC ACTACGTGCT GGAAGAAAAC
ACGGCGAAAA ACCCGGACAA CGTTTACGCC CTGCTGGATA AGGTATGGCC TGCTGCCATC
AATCAGGCCA AGTCTGAAGT AGCAGAGATG CAAAAGCTGA TTGATGCTGA AGGTGGTAAC
TTCAAGCTGG CGCCATGGGA CTGGGATTAC TACGCCGACA AAATCCGCGT CGCCAAGTAC
AGCTTTAACG AACAGGATAC CCGCCCCTAC TTCTCACTCG ATGCCACCAT CGAAGGCGTG
TTCTATACCG CCAACCGACT GTTTGGCCTC ACATTTAAAG AACGTAATGA CCTGCCCAAG
TACCATGAAG ATGTGCGTAC CTGGGAAGTG TTCGATAAAG ACGGTAAGCT GCTGGCCATT
TTCCTTGGCG ACTACTACGT CCGCGACTCC AAGCGTGGCG GCGCCTGGAT GAACGCTTAC
CGCTCACAGA GCGGCCTGGG TGATGAGCGT GTGGTGCCTA TTATCGTTAA CGTGCTCAAC
TACCCGCGCC CAACCGCGTC TGAACCTTCG CTGCTGACCT TCGATGAAGC CAGCACCCTG
TTCCACGAGT TTGGCCATGC CCTGCACGGT ATGCTGTCGA ATGTTGAGTA CGAGGCTCAA
TCAGGCACCT CGGTACCAAG GGACTATGTG GAGTTTCCAT CCCAGGTGAC CGAAAACTGG
ATGACTCAGC CAGATGTGCT GGCTCAGTTT GCCAAACACT ACAAAACCGG TGAAGTCATC
CCCGATGAAC TGGTCAAGAA AATCCAGGCC GCCAGTAAGT TCAATCAGGG CTTTGCCACC
GTTGAATACC TTGCCGCCAC CAAGTTGGAC CTCGACTGGC ACACCCTTGA GACCAGCGAA
GTGCAGGATG CCGCCGCTTT CGAAGCCGCC AGCCTCAAAA AGATGGGCCT GATTGACGAA
ATTGCGCCGC GTTACCGCTC AACCTACTTC AGCCATATCT TCTCCGGTGG TTACTCAGCC
GGTTACTATG GCTACATCTG GGCCGATATC CTCGGCGCGG ATGCTTTTGA GGCCTTCCGC
GAAAAGGGCA TCTTCAACCA GGATACCGCC AACGCATTTC GCGCCACTGT ACTGTCTCAG
GGCGGCAGCG AAGATCCGAT GAAGCTGTAC CGCGAATTCC GTGGCAAGGA AGCCAGCATC
GAGCCACTGC TCAAGAGCCG CGGCCTGCTG TAA
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| Protein sequence | MKGQTLKPLV VAMTLALGLT ACGNDENKQT EVANTPATVV EATTGGSEQA AITAVNPFFE
PYNTYQDIPA FEKIEEAHYL PAYEEGIKRQ QAEIQAIIDN PDAPSFANTI EAMEQSGKLI
KRVSAVFYNL TSADTTPGLQ AISKEVSPML SSARDDIFLN DKLFARVKAV YEQRETLGLN
TAQSRLLEDT YKAFSRGGAN LDEAGKAKLR ELNEKIGKLS LEFGDNVLAE TNSFELVVEN
KDDLSGLPQS VIDVAAATAK SRGKEGKWVF TTSRPSITPF LTYADNRELR QQLYTAYVER
ANHNDARDNK KALAEIAALR AERAQLLGYK THAHYVLEEN TAKNPDNVYA LLDKVWPAAI
NQAKSEVAEM QKLIDAEGGN FKLAPWDWDY YADKIRVAKY SFNEQDTRPY FSLDATIEGV
FYTANRLFGL TFKERNDLPK YHEDVRTWEV FDKDGKLLAI FLGDYYVRDS KRGGAWMNAY
RSQSGLGDER VVPIIVNVLN YPRPTASEPS LLTFDEASTL FHEFGHALHG MLSNVEYEAQ
SGTSVPRDYV EFPSQVTENW MTQPDVLAQF AKHYKTGEVI PDELVKKIQA ASKFNQGFAT
VEYLAATKLD LDWHTLETSE VQDAAAFEAA SLKKMGLIDE IAPRYRSTYF SHIFSGGYSA
GYYGYIWADI LGADAFEAFR EKGIFNQDTA NAFRATVLSQ GGSEDPMKLY REFRGKEASI
EPLLKSRGLL
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