| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1548 |
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| Symbol | |
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| ID | 4603800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1884325 |
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| End bp | 1885854 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780903 |
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| Product | ATP-binding region, ATPase-like protein |
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| Protein accession | YP_927425 |
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| Protein GI | 119774685 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.269339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATTC GACATTATTT ATTTCTACTG TTTGGTGGCC TGATATTGCT GCTTGGACTG
AGCCAGCTAC TGATTGGTGA GGCCCTGAAA CGGCAACTGG AGTCTGACTT GAGTGAGGAC
TCGGTGGCGC TGTCCCGTCA GTTGGTGGAC ATAGTCGTTG AGGATCTGGA TGAAAACCTG
CGATTTGTTA CCAAAGCGCC TGAAGTGGCC GCGATTCCGG AAGAGGCTGA GCTTGCACTG
ACCATTGAGG ACATTCGCCG ACACGTGCCT TCTGAGGCGC AGCTCATTGA AATGCACCAG
CATGAGCTCG AACGGGCCAT GGCCGAGGTT GAGGCCATGA TGGCAGAGCA GGAAAAAAAT
GAGGTGGCCG AGCAGCATCG CCAGCAAATA CTGGCATCAT TGAGTCGCGA GCTTGAGAAA
CTGGCCCGCA CCCGTGAAAG CCTCGCCAAG GAATATCAGC AGGCACTGCA CAAGTCTCTG
AGCACCATAG AAATTCGCCC GGCAGTGCAA AATAGTGGCA AGGTCACCAT CATACGTCAG
CTGGACGGCG GCCGGGTAGA GCGCAAAAAT ATCGAGTTCA ATCAAAGTAA TGTGTCCGAG
GCGCTGACAC GTTTCCGGGA ATGGATGTTT GCCCTTATCC TCACCAGCAG TTTCTTTGGG
CTGGTGTTTG TGTATTGGCT GAGTCGTCGT GTCAGCGGCC CACTGAGCGA GCTCGCTGCG
GGTCATCGTA AATTGGGCGA GGGACAGCTC GGTTACCGGG TGACCCCAAG GGGGGTGGAT
GAAATCAAAA CCATGCTCGA AGGCTTTAAT GCCATGAGTG AAAAACTGGC GCAGCTCAGT
GCCCGTGAAC AGCAAATGGC CAGTCAGCAG CACCTGGTGG AGCTTGGCGA AATCACCCGC
GGTATCGCCC ACAGTCTGCG TAATCCGCTG CATACCCTGG GGCTGCTTGC CGAAAACCAG
AGTCACACTG ACGATGCGGC GGCAAGAGCC GTGCAGCTTG GGCAAATACA GCAAAAAATT
GCGATGATGG ACAAGCACAT ACAATCCTTG CTGACCCTGT CATCCAACGA AGTGGACCGC
AGCCGTCCCA TTCCGGTCAA TGCAGTGGTG CAGGACATCC TGCTGGAACT CTCGGTGGCA
GGACTCAAGC CGCAACTCCA TTTAACCGGG TTTGACCTGG AACACTGGTT GCCTGGTATG
GAGTCGGAAA TCCGCAGTAT CCTGCATGCG GTTATCATTA ATGCAGTAGA AGCCCAGGCT
GACAGCGATA CACCTTGGCT TGGCATTGAT ATGAAAGCAG CGCAGGGGGA GTTGCTCGTC
ACAGTAACAG ACAAGGGTGT CGGTATGGAT GAGCGCTTGA TTGAACGGCT CGGCCAGCCC
CATGTCACCA CCAAACCCGA GGGCACGGGA ATGGGGCTTT ACATTGCCAG TAGGCTCTTG
GCGAGCCATT ATGGCGGCAG CCTGCACTTT GTGCGCCTCG ATGAAGGCGG CAGCCGGGTT
GTGGTGCATT TTAAACAGCA GGAGGCTTGA
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| Protein sequence | MSIRHYLFLL FGGLILLLGL SQLLIGEALK RQLESDLSED SVALSRQLVD IVVEDLDENL
RFVTKAPEVA AIPEEAELAL TIEDIRRHVP SEAQLIEMHQ HELERAMAEV EAMMAEQEKN
EVAEQHRQQI LASLSRELEK LARTRESLAK EYQQALHKSL STIEIRPAVQ NSGKVTIIRQ
LDGGRVERKN IEFNQSNVSE ALTRFREWMF ALILTSSFFG LVFVYWLSRR VSGPLSELAA
GHRKLGEGQL GYRVTPRGVD EIKTMLEGFN AMSEKLAQLS AREQQMASQQ HLVELGEITR
GIAHSLRNPL HTLGLLAENQ SHTDDAAARA VQLGQIQQKI AMMDKHIQSL LTLSSNEVDR
SRPIPVNAVV QDILLELSVA GLKPQLHLTG FDLEHWLPGM ESEIRSILHA VIINAVEAQA
DSDTPWLGID MKAAQGELLV TVTDKGVGMD ERLIERLGQP HVTTKPEGTG MGLYIASRLL
ASHYGGSLHF VRLDEGGSRV VVHFKQQEA
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