| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1543 |
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| Symbol | |
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| ID | 4603795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1879547 |
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| End bp | 1880401 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780898 |
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| Product | putative phosphonate ABC transporter, periplasmic phosphonate-binding protein |
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| Protein accession | YP_927420 |
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| Protein GI | 119774680 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCC TGAGAAAATA TTTAGCGCCG CTGCTGGTTG TACTTGCTCC TGCCGCTATG
GCTGAAACCT TTACCTTTAC AGCCATCCCT GACGAGGATG AAAGCCAGCT GCGTACCCGA
TTTGAAAAGG TTGCGGATTA TCTCGAAACC AAGCTCGGTG TTGAGGTCAA ATATGTGCCG
GTAAAATCCT ACTCCGCAGC GGTCACAGCG TTTCGTAACA ATCAGGTCCA ATTGGCCTGG
TTTGGTGGTT TGTCCGGTGT GCAGGCCCGT CGTTTGGTGC CGGGCTCTGA GGCTATCGCA
CAGGGCTTTG AAGATCAGTT CTTCAAGAGC TATTTTATTG CCCACCACAG CACAGGCCTT
GAGCGCAGCG AAAACTTTCC GGCCATTGGT GGCTACACCT TTACCTTCGG TTCCAAAGAC
TCCACCTCTG GCCGTTTGAT GCCGCAGTTC TTCCTTGAGC GTAATTTGGG CAAACGTCCG
AAAGACCTGT TCAAACGTGT TGGCTTCTCG GGCGATCACA GCCGTACGGT GTCACAGGTT
GAGGCTGGTG TATACCAGGT GGGCGCAGTC AACTATAAGG TGTGGGATTC CATGGTAGAA
GCCGGCAAGG TGGACACCAG CAAGGTGAAG GTGATTTGGG AAAGCCCGGT TTACCCAGAC
TATCAGTGGA CAGTGCGTGG CGACCTGAAC AAACGTTTTG GCGACGGTTT TAAAGCCAGG
GTAACCCAGG CGCTGCTGGA GATGAAAGAC CCCGATCTTC TGGCCTCCTT CCCCCGCCAG
TCATTCGTCC CAGCTGACAA TGAAGACTTC CAGCCGGTGG AAGACGTCGC CAAAGCCATT
GGCCTGATTG ACTGA
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| Protein sequence | MKLLRKYLAP LLVVLAPAAM AETFTFTAIP DEDESQLRTR FEKVADYLET KLGVEVKYVP
VKSYSAAVTA FRNNQVQLAW FGGLSGVQAR RLVPGSEAIA QGFEDQFFKS YFIAHHSTGL
ERSENFPAIG GYTFTFGSKD STSGRLMPQF FLERNLGKRP KDLFKRVGFS GDHSRTVSQV
EAGVYQVGAV NYKVWDSMVE AGKVDTSKVK VIWESPVYPD YQWTVRGDLN KRFGDGFKAR
VTQALLEMKD PDLLASFPRQ SFVPADNEDF QPVEDVAKAI GLID
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