| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1541 |
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| Symbol | |
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| ID | 4603793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1877346 |
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| End bp | 1878698 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639780896 |
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| Product | sensor protein PhoQ |
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| Protein accession | YP_927418 |
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| Protein GI | 119774678 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCT TTAAGTTAAA ACCCAAACGT CGCCTGCTGA CGAGGATGTA TTTGACATCC
CTGTCAATTA TTACCTTGGT GGGTTTTGGC TTGGCATGGA TGGTGAACAT TCTGCATGCC
CAAAACTCTT ATAACGAAGA AACTGCACAG CTGATTGCGG AAATCCCCCA GGTTGCAGCA
GAACTTCGTG AGCATGATCT CATCCCTGAT ACCAGCGCCT GGCTTGAAGA AAACCGCAAA
GGCGAGCGCT ATGTAATGGC AAGCTGTGAT GACAGATTCA AGCAGGTGTG GACTTCGGCC
ATGGCAGTAG ACAGAGGCCT GTTTGATACC TGCGAGCGTT TTGCCGACAT AAAGAACGAC
TCCCCGCCCT ATTACCTGAC CCTATCTGAC ACTCGTGGCT ACTACATCTA CATGCTGTCG
GTGGAAATCG CCAAAGTTCA TTACAATCTG CTGGTGATGA AGGACGCCGA AAAACTGGAG
CAGGAATACG ATAAGTTCAG CCGTCGCACC TATTTCCGCC TCGCCCTGGT GCTGGTCCTG
GCTCTGATCC TGCTTGTCAG TGCGGCCTAC TGGGGGATGC GCCCTCTGGT GCGAATGCGC
GAAGAGCTCA AGTCCATTGC CGATGGCAAG GCGAAATCAC TGTCTGATGG TTATCCGGTA
GAGCTCGAAG GGGTAACTCA GGCACTGAAC CAATTGCTGC AGCAATCTTC TGCCCAGCAG
GAGCGTTACC AGAATGCGAT GAACGACCTG GCGCACAGCC TGAAAACCCG TCTCGCCGCG
GTGCATGCCA TATTGGATGA CAAGGCATTG CATCAACAGG AGGTGAGCGA GAAAGTGATG
GAACAAGTGA GCCAGATGGA TCATCTGGTG AAGTATCAAT TAAAACGGGC CATGCTGGGA
CGTAAAGGCC TGAAACAGGA ACAGACTCAG CTGCTGCCAT TGGTCAATCA GCTGTCGCAA
ATGCTGTTCA AAATCTATCG TGACAAAGAC GTCCAGTTTT CGACGCGGAT CCTGCCGTTA
TTGCAATTCC CGGGAGACAA AGGGGATCTG ATGGAGCTCT GTGGCAACCT GATGGAGAAC
GCATTCAGGC TCTGTATTTC GACTGTACGC GTGAGCGCTG AAATCAACGA CAAAGGCGAA
TTTGAACTCA GGGTTGAAGA TGACGGCCCG GGCGTCGCAG AAAGCCTCAG GCAAAAAATC
CTTGAGCGGG GAGTACGGGC CGATACCCAT AGCCCGGGCC AGGGTATCGG TCTTGCGGTA
TGCCACGAGA TTGTCCAAAG CTACAATGGC ACCCTGACGA TTGAAGAGTC CAACCTTGAG
GGCGCCATGT TCAGGATCCG TATCCCACTG TAA
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| Protein sequence | MMRFKLKPKR RLLTRMYLTS LSIITLVGFG LAWMVNILHA QNSYNEETAQ LIAEIPQVAA
ELREHDLIPD TSAWLEENRK GERYVMASCD DRFKQVWTSA MAVDRGLFDT CERFADIKND
SPPYYLTLSD TRGYYIYMLS VEIAKVHYNL LVMKDAEKLE QEYDKFSRRT YFRLALVLVL
ALILLVSAAY WGMRPLVRMR EELKSIADGK AKSLSDGYPV ELEGVTQALN QLLQQSSAQQ
ERYQNAMNDL AHSLKTRLAA VHAILDDKAL HQQEVSEKVM EQVSQMDHLV KYQLKRAMLG
RKGLKQEQTQ LLPLVNQLSQ MLFKIYRDKD VQFSTRILPL LQFPGDKGDL MELCGNLMEN
AFRLCISTVR VSAEINDKGE FELRVEDDGP GVAESLRQKI LERGVRADTH SPGQGIGLAV
CHEIVQSYNG TLTIEESNLE GAMFRIRIPL
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