| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1539 |
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| Symbol | |
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| ID | 4603791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1875258 |
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| End bp | 1876514 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639780894 |
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| Product | putative metal dependent phosphohydrolase |
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| Protein accession | YP_927416 |
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| Protein GI | 119774676 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.359761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAA GTTGTAAGGT TCACGTCAAC CAACTTCAGG TTGGAAATTT TGTTCGCCTG
CCTGTTGCGT GGAAGGATCA TCCTTTTTTA TTCAACAGTT TCCGTGTAAA ACAAGAAGCG
CAAATTCAAC TTATCCGCAG CCTCGGCATA GAGCACGTCT TTGTTGATTT GGATCGCAGC
GACGTGATGC CGCTGCAGGA GCAACCAGTC TCAATGTCTG CGCCGGCAAA GGATCTGGCT
CCACTTATTG ACGAACTGGA CAAAAAAAAG CAGGAACAGA TTGAACAGCT GAAAAAGATG
CGCCGGGAGC TTGGCAAAAC CGAGCAGGAA TTTGACCGTT CCCTCGCAAA AATGCGCAAC
CTAATCAATA AGCTCAGAAG CCGTCCACTG AATGCCATTC AGGAAGCCGA AGAGCTGATT
CAGGACATCA CCCGTCAACT ACTCGCCAAT GAAAACCTGG TGTTACACCT GATGGGCGAT
GCCAAAAAAG ACGACGGCAT TTATTATCAC TCTCTCAACG TGGCAGTGCT TTGCATGTTA
TTGGCCAAGG AGCTTGGCTG GGACAGAGCG GATATTGAGG CCATAGGGAT GGGAGCACTG
TTTCATGATG TGGGTAAACT TAAGGTGCCA GCGCAAATCC TGAAAAAACA GGTAGGTTTG
ACCGCTCCTG AAATCAACTT TATCAAACAG CATCCTAACT TCGGTGTGGA GTTTGTGAAA
TTAACCGATA CCTTTCCTGA GGCCGCGCTC CCCGTTATTA CCAATCATCA CGAGTTTCTT
GATGGCAGTG GTTATCCCAA GGGGCTTAAC GCTAAGGACC TTTGCCCACT GTCACAACTG
GTTGCTGTGG TTAACGAATA CGATACCCTG TGCCATCCCG ATAATATCAG CAAGGCAAAA
ACCCCTTATG CGGCACTGGG TTATTTATTT AAAAACTACA AGGGCAAACT TAACAGCGAG
TTTGTTGGCC AGCTTATTCG TATGCTTGGG ATTTACCCTC CAGGCTCTGT AGTGGAATTA
ACCAGTGGCC AGTTTGGTAT GGTGATGGCG GTAAACATCA GTAAGCTGCT GTTTCCTCGT
ATCATGGTTT ATGATGCGTT GGTGCCCAAA GATCAGGCCC CCATTATCGA TTTGGAAGCC
GAAGGGCTAA GCATAGTACG CTGCCTGCCA CCGGCTGCCC TGCCCGAAAA AATCTTTAAC
TATTTAAATC CAAGGGAGCG CGTGACCTAC TTCTTTGGCC AGGAAAGTAA AAGCTGA
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| Protein sequence | MSKSCKVHVN QLQVGNFVRL PVAWKDHPFL FNSFRVKQEA QIQLIRSLGI EHVFVDLDRS
DVMPLQEQPV SMSAPAKDLA PLIDELDKKK QEQIEQLKKM RRELGKTEQE FDRSLAKMRN
LINKLRSRPL NAIQEAEELI QDITRQLLAN ENLVLHLMGD AKKDDGIYYH SLNVAVLCML
LAKELGWDRA DIEAIGMGAL FHDVGKLKVP AQILKKQVGL TAPEINFIKQ HPNFGVEFVK
LTDTFPEAAL PVITNHHEFL DGSGYPKGLN AKDLCPLSQL VAVVNEYDTL CHPDNISKAK
TPYAALGYLF KNYKGKLNSE FVGQLIRMLG IYPPGSVVEL TSGQFGMVMA VNISKLLFPR
IMVYDALVPK DQAPIIDLEA EGLSIVRCLP PAALPEKIFN YLNPRERVTY FFGQESKS
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