| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1532 |
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| Symbol | |
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| ID | 4603784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1862689 |
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| End bp | 1863729 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780882 |
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| Product | putative proline racemase |
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| Protein accession | YP_927409 |
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| Protein GI | 119774669 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3938] Proline racemase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000263181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACCCG TTCAGTTAAG CCCTGAATTA CTTGGCCAAT TTCGCCGGAT AACCACCCTT
GATGCCCACA CGGAAGGAGA ACCTCTGAGG ATCATTACCT CGGGTTATCC CGCCATCCCC
GGGAACACCA TGTTGGACAA ACGTAAGTTT TTAGCTGAGC ACCTGGATGA GTATCGCCAG
TTGTTGATGT TTGAACCGCG GGGCCATGCC GACATGTACG GCGTGCTCCT CACTGAACCG
GTGTCAAAAG GCGCCGATTT TGGCGTCCTG TTTTTGCACA ACGAAGGTTA TTCCAGCATG
TGTGGCCATG CCGTATTGGC GCTTGCCACG GTTTTGTGCC AAACCGGCGC CATCGACTTT
GACGGCTGCA GTGCTGAAAT AGGGATAGAT GCGCCGGCAG GTTTTATCCG GGCCTTTGCC
GAAAAAGACA CCACTGGTCG CATTCAGGCG AGTTTTTTAA ACGTGCCATC CTGGGCCGAA
GCGCTGGATT TATCCATCGA AGTGCCGGGT ATAGGTGAGG TGCCATTCGA TATCGGCTTT
GGTGGCGCTT ATTATGCGTA TGTGGATGCC GATGCTTTGG GGCTGGACTG CAGCGCAGAC
AATGTCAGTC AGTTGATTGA CTGGGGCAGG CGAATCAAGC AGGCGGTGAT GGCATCGTAT
CCCATCAAGC ATCCCCTTGA TGAAGACCTG AGCTTTTTAT ATGGCACCAT CTTTACCTCC
AGGCATACCG CAGTACCCGG GGCACATTCG CGCCATGTGT GTGTGTTTGC TGATGGCGAG
GTTGACCGTT CCCCCACGGG CACCGGCGTG GCAGGTCGTA TCGCCTTGCT GCACGCCAGG
GGAAAAGTGG AGCTGGCACA GGCACTCACC ATTGAGAGCA TTGTTGGCGG GAAAATGACT
GTTGAAGCCA GGGAACGGGT GGATTTTCAT GGCAGGGACG CACTTATTCC ACGGGTGTCA
GGCCGCGCCT TTATTACCGG AGAGCACACC TTTTTACTGC ACCCGGACGA TATTTTTCAA
ACCGGCTTTT TACTGCGTTG A
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| Protein sequence | MGPVQLSPEL LGQFRRITTL DAHTEGEPLR IITSGYPAIP GNTMLDKRKF LAEHLDEYRQ
LLMFEPRGHA DMYGVLLTEP VSKGADFGVL FLHNEGYSSM CGHAVLALAT VLCQTGAIDF
DGCSAEIGID APAGFIRAFA EKDTTGRIQA SFLNVPSWAE ALDLSIEVPG IGEVPFDIGF
GGAYYAYVDA DALGLDCSAD NVSQLIDWGR RIKQAVMASY PIKHPLDEDL SFLYGTIFTS
RHTAVPGAHS RHVCVFADGE VDRSPTGTGV AGRIALLHAR GKVELAQALT IESIVGGKMT
VEARERVDFH GRDALIPRVS GRAFITGEHT FLLHPDDIFQ TGFLLR
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