| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1526 |
|---|
| Symbol | |
|---|
| ID | 4603778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 1856248 |
|---|
| End bp | 1856838 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639780876 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_927403 |
|---|
| Protein GI | 119774663 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTAC CCCTTCTCTG GATTGGTGGC GCCGCACTCG GTGCGCTGGC CATGGCTGAT
GCCCGGGAAT CACGTCGACG CTTGCAGTAT CAACGTGCCC GTGGTCTGAC GGCTGTCGAC
CATGGTGACA AATCTGTGGT GCTGTCGCCC AGCACCTGGC AAACCGGTGG CAAGCAAAGC
ACGCCGCTGC CAGGCGCTTT GATGTGTTGT CATGTGTTTG GCGTGATTGA ACATACAGGT
ATCTACCTTG GTGATGGTTT GATTGCAGAG CTGCACGGCA GCGGTCTTAT CCGTGCTGTA
TCGGCAGAGC GATTTCTCCA TGGGCGCACC GGCAGCCGCA TTTTTGTCGC GGCTGACGCC
AACCATCAGG CACTGGCGCA CGAAATGGCC ACGGAAAGAG CCGCCATGTC ACTGTTTCAG
TATCGTGATT ACGATCTGTT GGAAAACAAC TGCCATCGAT TTGTATGGCA TTGCATCAGC
GGCGATGACA GAGAAATCAA GGGCTTTGGC GAGCTGAACC AATTGGTGGC ATCTTTTTAT
GGCAAAGCCA TCTATTGGGA CGAGGCCAGG CTGTCTTATC CACGGGAATG A
|
|---|
| Protein sequence | MPLPLLWIGG AALGALAMAD ARESRRRLQY QRARGLTAVD HGDKSVVLSP STWQTGGKQS
TPLPGALMCC HVFGVIEHTG IYLGDGLIAE LHGSGLIRAV SAERFLHGRT GSRIFVAADA
NHQALAHEMA TERAAMSLFQ YRDYDLLENN CHRFVWHCIS GDDREIKGFG ELNQLVASFY
GKAIYWDEAR LSYPRE
|
|---|
| |