Gene Sama_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1521 
Symbol 
ID4603773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1850669 
End bp1851226 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content52% 
IMG OID639780871 
ProductDsbA family thiol:disulfide interchange protein 
Protein accessionYP_927398 
Protein GI119774658 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0606575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTGT CTGCCATGGC AGCGACCTTT GTTGAAGGTA AGGATTATGT CAGGGTAGAA 
GGCTTCAGCG AGAGCCATAC CCCCGTGCTA CGGGAGTTTT TTTCCTATAA CTGCCCTCAT
TGTTTTCGCA TGGACCACAC CATCGAAGAA GCGGTGGGTT TGGTCGCAAA AGAGGTTCGT
TTCGAGCGAA CGCCGGTCGG CGCAGGCCGT AACCCCTGGC AAATGAGCCA ACTGGCTTAT
TATCTTGCTC AAAAATTCAA CGTAACCGAC CAGACCCACG GCGCCATTTT CAAGCAGGTT
CAAGAAGTCG CTCCATTTCA GTCTGAAGCT GACGTGCGGC AGTTTTTTGT GTCCCAGGGG
CTTAAGGCTG ACGAACTGGA TAAGGCAATC GCGTCATCCG ACCGTAAACT GGCCATGATG
ACTTTTGATA CCGAGGCGCA GCTCTCAGGT ATCCGTGGTG TGCCAAGCCT GCTGGTGAAT
GGCAAATACA TGTTGAACAT TCAGGGCCGC AGCAGCGCTG AGATAGCCGA GTTGGTGCAA
TACCTGGTCA AGCAGTAA
 
Protein sequence
MSLSAMAATF VEGKDYVRVE GFSESHTPVL REFFSYNCPH CFRMDHTIEE AVGLVAKEVR 
FERTPVGAGR NPWQMSQLAY YLAQKFNVTD QTHGAIFKQV QEVAPFQSEA DVRQFFVSQG
LKADELDKAI ASSDRKLAMM TFDTEAQLSG IRGVPSLLVN GKYMLNIQGR SSAEIAELVQ
YLVKQ