Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1521 |
Symbol | |
ID | 4603773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1850669 |
End bp | 1851226 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639780871 |
Product | DsbA family thiol:disulfide interchange protein |
Protein accession | YP_927398 |
Protein GI | 119774658 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0606575 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCTTGT CTGCCATGGC AGCGACCTTT GTTGAAGGTA AGGATTATGT CAGGGTAGAA GGCTTCAGCG AGAGCCATAC CCCCGTGCTA CGGGAGTTTT TTTCCTATAA CTGCCCTCAT TGTTTTCGCA TGGACCACAC CATCGAAGAA GCGGTGGGTT TGGTCGCAAA AGAGGTTCGT TTCGAGCGAA CGCCGGTCGG CGCAGGCCGT AACCCCTGGC AAATGAGCCA ACTGGCTTAT TATCTTGCTC AAAAATTCAA CGTAACCGAC CAGACCCACG GCGCCATTTT CAAGCAGGTT CAAGAAGTCG CTCCATTTCA GTCTGAAGCT GACGTGCGGC AGTTTTTTGT GTCCCAGGGG CTTAAGGCTG ACGAACTGGA TAAGGCAATC GCGTCATCCG ACCGTAAACT GGCCATGATG ACTTTTGATA CCGAGGCGCA GCTCTCAGGT ATCCGTGGTG TGCCAAGCCT GCTGGTGAAT GGCAAATACA TGTTGAACAT TCAGGGCCGC AGCAGCGCTG AGATAGCCGA GTTGGTGCAA TACCTGGTCA AGCAGTAA
|
Protein sequence | MSLSAMAATF VEGKDYVRVE GFSESHTPVL REFFSYNCPH CFRMDHTIEE AVGLVAKEVR FERTPVGAGR NPWQMSQLAY YLAQKFNVTD QTHGAIFKQV QEVAPFQSEA DVRQFFVSQG LKADELDKAI ASSDRKLAMM TFDTEAQLSG IRGVPSLLVN GKYMLNIQGR SSAEIAELVQ YLVKQ
|
| |