| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1520 |
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| Symbol | |
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| ID | 4603772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1849775 |
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| End bp | 1850590 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780870 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_927397 |
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| Protein GI | 119774657 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00786287 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATT TTAAAACCAT TTCTATTATC GGCTGTGGCT GGTTCGGTTT CCCGCTTGCC
AGACTACTGA AGAGCAAGGG ATTGGCGGTT AAAGGATGCA AACGTACTCC AGCAGGAGTG
GAGGCACTCA CACAAGCAGG GATTGAAGGC TATTGTGTGG GTTTAGATAA GGATGCTGTC
CTGCCCGAAG GACTGCTCGA TGCCGATGTG CTGGTGATCA ACCTCCCTCC AGGCCTTCGC
CGCGGCGATT CAGGCTACCT TGAGCGCCTC GCTACATTGC GTGATGCCGT AAAAACGCCT
CCCAAGCGAT TGATTTTTAT AAGCTCTACT GGAGTTTATC CCGATTTCCC CAAACTACTG
GATGAACACG ACAGCAGTGC TCATTCCCCC ACGGCGGCAA TCTTACTGGG TGCTGAAGCC
CTGTTTGCCC CGTTTAATAC CACTGTGGTT CGTTTTGCCG GACTGGTGGG GCCAGAGCGA
CACCCCGGGC GCTTTTTTGC CGGTAAAAAA GACATCGCGG GTGGGGCCGT GCCGGTTAAC
TTGGTGCATC TTACCGATTG CATCGAGGGT GTAATGGCGC TTATTTTTGC CGATACCCTG
GCACCCTGTT ATAACCTGTG CGCGCCTAAG CACCCCACAA AGGCTGAGTT TTACACCCTG
GCGGCACAGG TTGCTGGCTA TGAGTTACCA GCGTTTATTG CTGGCGATGA CACCGACGGC
AAGCTTGTCG ACGGTAGCCT GATTTGTCGC TTGCACGGCT TTATGTATTC TTACCCCGAT
CCTGTGGCGA TGCTGCATGC TGCAGATGCG TTTTAA
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| Protein sequence | MSDFKTISII GCGWFGFPLA RLLKSKGLAV KGCKRTPAGV EALTQAGIEG YCVGLDKDAV
LPEGLLDADV LVINLPPGLR RGDSGYLERL ATLRDAVKTP PKRLIFISST GVYPDFPKLL
DEHDSSAHSP TAAILLGAEA LFAPFNTTVV RFAGLVGPER HPGRFFAGKK DIAGGAVPVN
LVHLTDCIEG VMALIFADTL APCYNLCAPK HPTKAEFYTL AAQVAGYELP AFIAGDDTDG
KLVDGSLICR LHGFMYSYPD PVAMLHAADA F
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