| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1514 |
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| Symbol | |
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| ID | 4603766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1839719 |
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| End bp | 1843138 |
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| Gene Length | 3420 bp |
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| Protein Length | 1139 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780864 |
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| Product | SMC family protein |
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| Protein accession | YP_927391 |
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| Protein GI | 119774651 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.192441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTGA AACAAATAAA ACTTGCTGGC TTCAAGTCGT TTGTCGATCC CACCAGGATC
CCATTCCCCA ATCCTCTAAC CGCCATCATA GGCCCTAATG GCTGCGGTAA ATCCAACGTG
ATTGATGCCG TGCGCTGGGT GCTGGGCGAA AGCTCTGCCA AGCATTTGCG CGGCGACTCC
ATGACTGACG TTATCTTCAA TGGCTCCAGC GCCCGCAGGC CCGTGTCCGT TGCCGGGGTC
GAGCTGGTCT TTGATAACCG GGAAGGGCGT CTTGGTGGCC AGTACGCCAG CTATGAAGAA
ATCGCAGTAA AGCGTCAGGT AAGCCGTGAT GGAGAGTCGC TGTATTTCCT CAACGGCCAG
AAATGTCGCC GCAAGGACAT CACAGATCTC TTTATGGGCA CCGGCCTTGG GCCGCGAAGC
TACGCGATTA TCGAACAGGG CATGATTTCG CGCCTGATTG AATCCCGGCC CCAGGAGCTC
AGGGTTTTTA TCGAAGAAGC CGCCGGTATT TCCCGCTATA AAGAGCGTCG CCGCGATACC
GAAAACCGCA TCCGCCATAC CCGCGAAAAT CTGGAGCGTC TGGGCGATAT TCGACTGGAA
CTGGGTAAAC AGCTCGACAA GCTCGCCGTG CAGGCCGAGG CCGCCAAACG TTACCGGGAA
TACAAACAGG CCGAACGTAC CACCCACGCC GAGCTGCTGG TGATGCGCTA TCAGGAAATC
TGTCAGCAGG CCGATGCCCT GGGCCGCGAA ATTACGCAGC AGGACTTTCT ATACCAGAGC
GCCAAAACCT CCCTTGATAC CACCGCCGCC AGGCTCGATG AGCAGAAGCT CGTGCTCGCA
GCTTTGGTGG ATGAAGAGCA AGACACGCTC GAAGCTTACT ATTTGGCCGG AACCGAAGTG
GCGCGCCTCG AGCAGCAACT GTCCCATTTG GAAGAGCGCA GTCACAGTCT GCGAAGCCGG
GGAGATAGCC TTGCAGAGGA GATTTCTGGG CTCATGGCCA GGCAGGCGTC GCTCGAGGCC
GCTCAGCAAG AAGCGGCCGA CAAGCTTGCC GGTCAGGAAG ACGCTTTACT GGGATTGGAA
GAGACTCAGG ACGCCTGGAG TCAAAGCGCT GAAGAAGCCG AAGAGGTGTT GGAGCAGCTC
AAGGATGCTG TGACCCAGGC GGAGCGCCGC CACGGTGAAA CCAAGGCACG ATGCGAGCTG
ACTTCCCAGC GACTCGTCCA TCTCAAACAG GTGAGTCAGG AAAAAGCGCA GTCACTGTCA
GGATACCGTG AGCAGCAAGC GTCCCAGGGG GATGAGGACG TCGACCCGGT TACGCCGCCA
TCGGAGCAAA TTCTGGTGCC GCTGACGGTA AGGTTTGACA ACGCCAAAGC GGCGGAGTCT
CAGGTAAAGG CGGCGCTTGT AGAGTGTGAA CAGGCACTGG CAAAGTGCCG TGGCGAGCAG
AGCGAAGCAC AGGGGCGCTA TTCGGTGCTG TCCAGGCTGC TTGATGACAA CGCAGTCAAT
GATGCTGGCT CCGCGCGCAC CAAACTCTGG CAGCGTCTTG ATGTGGCTGC GGGGTGGGAG
AAGACCGCAG AGCTGCTGCT TGGGCATCTG TTGGAGCAGC CTCTTTTTGA AGACACGGCC
TTTGGTGAGG ATGCGTTTGA TGGCCGGGGA TTCAGATATC AGGAAAAGGG CGACTGGGGC
ATTATGCAGG CGCCAGCCAA TCTTGCGCCC TGGCTTGATA CGGTAGGCTT TGCCGAAAGC
TTGAATGAGG CTCAGGAGCG CCTGGTCGGT ACGGCGCAAA GCACGCTCAT TGCCACCAAG
GATGGCTATC TGGTCGGCCA TGGGTTGGTG TTGCAACAAC AGGGTACCGG CACCGACAAG
GTGGCACTTA AAGCAGAGGC TGAAGCGCTT GGTGCCCGTA TTGGCCAGAT ACAGGCTGAG
CTTGCTCAGT ATGAGCGGGC GGTGGCGCAG CAGCGTGATG CGCTGAATCT GGCCCGTATT
CATCGGGAAG CCGTTGAAGC CGAGTTATTT GAAGCAAAAC AACAGCAGGC TCGGCAGCAA
ACCCTGTGGG AAGCCAGCGT CGCTCATCAG GCCCAGCGCG CCAAACAGCG AGCCTTCATC
GATGAACAAA TTCAGCGTTT GACCCAGCAG CACGAGCAGT CTTTGCTGGA GCTGGAGGTG
GCAGACGAAG CCCTGGTGCA GCAGGAAGAA GCATTGGAGC AGGCGGCAGA GGCCTTGGCA
CAGGTACGGG AGCAGCTTAT CCCGGCCAGA CGCATGGCTG AAGAGCGTCG AGCCTCAGTC
GCAAACATCG ATAAATCGGT CGAAGCGGCT AAGGCCACAC GGGCCGAACT GGCCACGTCT
CTCGCCCTTA TCAACCAGCA AATGGCATCG GGAAAGGAGC AACTGTCAAA ATTATTGACA
CAAAAAGCGA CCCTGGACGC CGAGCTGAAA GCCCAATCTG AGCACAGCGG TGATGCCGAC
CGCGAAGCCT TATCGATGAA ATTGCGTGAG CAGCTTGCCA CCCAGCAAAC AAGGCAAACG
GCGCTCGCGG AAAACCGCAG TCGGCAGGCT CAGGTTCAGG AACAGATTGA TGCTTTACTA
TTGAAGCAAA AACAAGAAGT TGGCAAGATA GACCACTTGA CTCATACCCT CGAATCGTTA
AAGCTACGAC GGGAAGGTTT AAAGGGGCAG GGCGACACCC AACTTGGGCA GTTGGCCGAG
GCCAATATTC GACTCAATGA GGTGTTGCCA AGCGTACCTC CCCACGCCTC TGTGGAGGAG
TGGCAGCAAA GATTGGAGAA GCTTCGAAGT AAAATCAGTC GCTTGGGCGC CATAAATTTG
GCGGCGATTG AAGAGTACGA TGAAGCCAAG GCGCGCAAAG ATTATTTGGA TGAGCAGGAC
AGGGATCTCG AGCAGGCGCT GGAAAGCCTT GAAGAGGCCA TCCGGAAGAT AGACAGGGAA
ACCCGCAGCC GCTTTAAAGC GACCTTTGAA CAGGTCAATG CCGATCTGGG GACCTTGTTT
CCCAAGGTGT TTGGGGGTGG CAGCGCTTAT CTTGCGCTTA CAGACAATGA TTTACTGGAA
ACCGGTGTGA CCATCATGGC GAGGCCGCCC GGGAAAAAGA ACTCCACAAT TCACCTGCTC
TCGGGTGGTG AAAAGGCGCT GACCGCTTTA TCATTGGTGT TCGCAATTTT CAGGTTGAAT
CCAGCCCCTT TTTGTATGCT CGACGAGGTC GATGCACCGC TGGATGATGC CAACGTTGAC
CGATTCTGCA GACTGCTGCA GGAAATGTCA GCCAGCGTGC AGTTTATATA CATCAGCCAC
AATAAGATAA CGATGGAAAT GGCTGATCAG TTGGTAGGTG TGACCATGCA TGAGCCCGGC
GTATCCCGCA TCGTTGCGGT GGACATCGAA GAAGCCGTGG CCATGGCACA CACGGAATGA
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| Protein sequence | MRLKQIKLAG FKSFVDPTRI PFPNPLTAII GPNGCGKSNV IDAVRWVLGE SSAKHLRGDS
MTDVIFNGSS ARRPVSVAGV ELVFDNREGR LGGQYASYEE IAVKRQVSRD GESLYFLNGQ
KCRRKDITDL FMGTGLGPRS YAIIEQGMIS RLIESRPQEL RVFIEEAAGI SRYKERRRDT
ENRIRHTREN LERLGDIRLE LGKQLDKLAV QAEAAKRYRE YKQAERTTHA ELLVMRYQEI
CQQADALGRE ITQQDFLYQS AKTSLDTTAA RLDEQKLVLA ALVDEEQDTL EAYYLAGTEV
ARLEQQLSHL EERSHSLRSR GDSLAEEISG LMARQASLEA AQQEAADKLA GQEDALLGLE
ETQDAWSQSA EEAEEVLEQL KDAVTQAERR HGETKARCEL TSQRLVHLKQ VSQEKAQSLS
GYREQQASQG DEDVDPVTPP SEQILVPLTV RFDNAKAAES QVKAALVECE QALAKCRGEQ
SEAQGRYSVL SRLLDDNAVN DAGSARTKLW QRLDVAAGWE KTAELLLGHL LEQPLFEDTA
FGEDAFDGRG FRYQEKGDWG IMQAPANLAP WLDTVGFAES LNEAQERLVG TAQSTLIATK
DGYLVGHGLV LQQQGTGTDK VALKAEAEAL GARIGQIQAE LAQYERAVAQ QRDALNLARI
HREAVEAELF EAKQQQARQQ TLWEASVAHQ AQRAKQRAFI DEQIQRLTQQ HEQSLLELEV
ADEALVQQEE ALEQAAEALA QVREQLIPAR RMAEERRASV ANIDKSVEAA KATRAELATS
LALINQQMAS GKEQLSKLLT QKATLDAELK AQSEHSGDAD REALSMKLRE QLATQQTRQT
ALAENRSRQA QVQEQIDALL LKQKQEVGKI DHLTHTLESL KLRREGLKGQ GDTQLGQLAE
ANIRLNEVLP SVPPHASVEE WQQRLEKLRS KISRLGAINL AAIEEYDEAK ARKDYLDEQD
RDLEQALESL EEAIRKIDRE TRSRFKATFE QVNADLGTLF PKVFGGGSAY LALTDNDLLE
TGVTIMARPP GKKNSTIHLL SGGEKALTAL SLVFAIFRLN PAPFCMLDEV DAPLDDANVD
RFCRLLQEMS ASVQFIYISH NKITMEMADQ LVGVTMHEPG VSRIVAVDIE EAVAMAHTE
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