Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1508 |
Symbol | |
ID | 4603760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1831345 |
End bp | 1832313 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639780858 |
Product | cysteine synthase A |
Protein accession | YP_927385 |
Protein GI | 119774645 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | [TIGR01136] cysteine synthases [TIGR01139] cysteine synthase A |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAA TCTTTGAAGA CAATTCTTAC ACGATTGGCA ATACCCCCCT GGTACGATTG AACCGTGTCA GCAACGGCAA GGTGCTGGCC AAGGTTGAAG CCCGTAACCC CAGCTTCTCT GTAAAGTGCC GTATCGGCGC CAACATGATT TGGGATGCCG AAAAGCGTGG CGTGCTGACC AAAGACAAGG AACTCATCGA ACCTACGTCC GGTAACACTG GTATTGCGCT GGCCTATGTG GCCGCGGCCC GTGGTTACAA ACTGACCCTG ACCATGCCCA ACACCATGAG CCTGGAGCGC CGTAAGCTGC TCAAGGCACT GGGTGCCAAC CTGGTGCTGA CCGAAGGCGC CAAGGGCATG AAAGGCGCTA TCGAAAAAGC CGAAGAAATC CGTCAGTCTG CACCGGAAAA ATACGTTCTG CTGCAGCAGT TTGACAACCC TGCCAACCCG GAAATCCACG AAAAAACCAC AGGCCCAGAG ATCTGGAATG ATACCGACGG TGCCGTTGAC GTGGTGGTGG CCGGTGTGGG TACCGGTGGT ACCATCACAG GTGTGAGCCG CTATATCAAG AAGGCACAGG GCAAGGCCAT AGTGTCTGTG GCCGTTGAGC CTGTTGACTC ACCGGTTATC AGCCAAACAC TTGCTGGTCA GCCTGTTCAG CCAGGTCCGC ACAAAATTCA GGGCATTGGC GCCGGTTTTA TTCCGGGCAA CCTTGACCTT GAACTGATTG ACCGTGTTGA AACCGTCAGC AACGAAGACG CCATCGAGAT GGCCCACCGC CTGATGAAGG AAGAAGGCAT TCTGGTGGGC ATTTCCTCCG GTGCAGCCGT GGTTGCCGCC AACCGCATCG CAGCCCTGCC CGAGTTTGCT GATAAAAACA TCGTGGTCAT ACTGCCATCC GCCGCTGAAC GTTACCTGTC TTCAGTACTG TTCCAGGGTC AGTTTGGCGA CCAGGAAAAC GTGCAGTAA
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Protein sequence | MSKIFEDNSY TIGNTPLVRL NRVSNGKVLA KVEARNPSFS VKCRIGANMI WDAEKRGVLT KDKELIEPTS GNTGIALAYV AAARGYKLTL TMPNTMSLER RKLLKALGAN LVLTEGAKGM KGAIEKAEEI RQSAPEKYVL LQQFDNPANP EIHEKTTGPE IWNDTDGAVD VVVAGVGTGG TITGVSRYIK KAQGKAIVSV AVEPVDSPVI SQTLAGQPVQ PGPHKIQGIG AGFIPGNLDL ELIDRVETVS NEDAIEMAHR LMKEEGILVG ISSGAAVVAA NRIAALPEFA DKNIVVILPS AAERYLSSVL FQGQFGDQEN VQ
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