Gene Sama_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1508 
Symbol 
ID4603760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1831345 
End bp1832313 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content55% 
IMG OID639780858 
Productcysteine synthase A 
Protein accessionYP_927385 
Protein GI119774645 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID[TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAA TCTTTGAAGA CAATTCTTAC ACGATTGGCA ATACCCCCCT GGTACGATTG 
AACCGTGTCA GCAACGGCAA GGTGCTGGCC AAGGTTGAAG CCCGTAACCC CAGCTTCTCT
GTAAAGTGCC GTATCGGCGC CAACATGATT TGGGATGCCG AAAAGCGTGG CGTGCTGACC
AAAGACAAGG AACTCATCGA ACCTACGTCC GGTAACACTG GTATTGCGCT GGCCTATGTG
GCCGCGGCCC GTGGTTACAA ACTGACCCTG ACCATGCCCA ACACCATGAG CCTGGAGCGC
CGTAAGCTGC TCAAGGCACT GGGTGCCAAC CTGGTGCTGA CCGAAGGCGC CAAGGGCATG
AAAGGCGCTA TCGAAAAAGC CGAAGAAATC CGTCAGTCTG CACCGGAAAA ATACGTTCTG
CTGCAGCAGT TTGACAACCC TGCCAACCCG GAAATCCACG AAAAAACCAC AGGCCCAGAG
ATCTGGAATG ATACCGACGG TGCCGTTGAC GTGGTGGTGG CCGGTGTGGG TACCGGTGGT
ACCATCACAG GTGTGAGCCG CTATATCAAG AAGGCACAGG GCAAGGCCAT AGTGTCTGTG
GCCGTTGAGC CTGTTGACTC ACCGGTTATC AGCCAAACAC TTGCTGGTCA GCCTGTTCAG
CCAGGTCCGC ACAAAATTCA GGGCATTGGC GCCGGTTTTA TTCCGGGCAA CCTTGACCTT
GAACTGATTG ACCGTGTTGA AACCGTCAGC AACGAAGACG CCATCGAGAT GGCCCACCGC
CTGATGAAGG AAGAAGGCAT TCTGGTGGGC ATTTCCTCCG GTGCAGCCGT GGTTGCCGCC
AACCGCATCG CAGCCCTGCC CGAGTTTGCT GATAAAAACA TCGTGGTCAT ACTGCCATCC
GCCGCTGAAC GTTACCTGTC TTCAGTACTG TTCCAGGGTC AGTTTGGCGA CCAGGAAAAC
GTGCAGTAA
 
Protein sequence
MSKIFEDNSY TIGNTPLVRL NRVSNGKVLA KVEARNPSFS VKCRIGANMI WDAEKRGVLT 
KDKELIEPTS GNTGIALAYV AAARGYKLTL TMPNTMSLER RKLLKALGAN LVLTEGAKGM
KGAIEKAEEI RQSAPEKYVL LQQFDNPANP EIHEKTTGPE IWNDTDGAVD VVVAGVGTGG
TITGVSRYIK KAQGKAIVSV AVEPVDSPVI SQTLAGQPVQ PGPHKIQGIG AGFIPGNLDL
ELIDRVETVS NEDAIEMAHR LMKEEGILVG ISSGAAVVAA NRIAALPEFA DKNIVVILPS
AAERYLSSVL FQGQFGDQEN VQ