| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1507 |
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| Symbol | |
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| ID | 4603759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1830583 |
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| End bp | 1831245 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780857 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_927384 |
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| Protein GI | 119774644 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACAAC CCTTACTTTA TATAGGTCGG CAAGCGAGCC GCAGTGATGG CCAGGCCCGC
AGGGTCGCCA TTCTCGAGGC TACCCTTAAG CTGATTGTCG CCGAAGGGAT CCGCGGTGTA
CGCCACCGGG CGGTGGCCTC AATGGCCCAG GTTCCACTGG CTTCAACCAC GTATTATTTC
AGTGATATCA AAGAATTGAT CCACGATGCC CTCACATTTC ACGTGGAAAA AACCATGGCA
GCCAATCTGA CCCTGGAAAA GCAGAGTTTT GCTGCGCTGG GAGACTTTAA CGCTGCCTCG
CTTAAAGACC GCAGTCGCCG GGCGCAGCTG GTCGCCATGC TGAGCGGCTT TGTCTGTGAA
CATATCAAGA GCCATGCGAA AGACAGAGAA GGGCGGTTGC TTGAGCTGGC ATTTCATGAC
GAGGCGCTGC GTAATCCGGC GCTGGCCCAG GCGATTGTGG CGCTTGATGA TGCCATTTTT
GGCCCCATGA TGGGCTTTTT CAGTCAAATC GGTGCCGGTG CGCCACGGGC GCTGGCGTGT
CAGATGCTGG GACTTATCAG GCTGCTTGAG TATCGCTATA CGGTGCGGCC ATGGGACGAA
GAAGAGTGCA GGAGCGCCGT GACGTCCCTG CTCGAATCCC AATTTGTCGC GATTTCTGTA
TAA
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| Protein sequence | MLQPLLYIGR QASRSDGQAR RVAILEATLK LIVAEGIRGV RHRAVASMAQ VPLASTTYYF
SDIKELIHDA LTFHVEKTMA ANLTLEKQSF AALGDFNAAS LKDRSRRAQL VAMLSGFVCE
HIKSHAKDRE GRLLELAFHD EALRNPALAQ AIVALDDAIF GPMMGFFSQI GAGAPRALAC
QMLGLIRLLE YRYTVRPWDE EECRSAVTSL LESQFVAISV
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