Gene Sama_1494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1494 
Symbol 
ID4603746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1807689 
End bp1809827 
Gene Length2139 bp 
Protein Length712 aa 
Translation table11 
GC content57% 
IMG OID639780844 
Productphosphate acetyltransferase 
Protein accessionYP_927371 
Protein GI119774631 
COG category[C] Energy production and conversion 
COG ID[COG0280] Phosphotransacetylase 
TIGRFAM ID[TIGR00651] phosphate acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000825995 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCA ACATCATGTT GGTTCCCATT GGTACAGGCG TTGGCCTCAC CTCTCTGAGC 
CTGGGTATGG TGCGCGCACT GGAACGCCAT GGCGTAAAAG TGCAGTTTTT CAAGCCCATC
AGCCAGCAGC GCCCTGCCGA TTCAGGCCCT GAACGCTCAA CCACTATCCT GTCCAAGTCG
CCCACGGTGA ACCCGTTGGA GCCCTTTGAC ATGCAGCACG CCGAGTCGCT TATCCGTACC
GACCAGACCG ATGTGCTGAT GGAGCAAATC ATTGCCCGCG CCAGCGAAAT TGCAGCCAAC
ACCGAGACGC TTATCATCGA AGGTTTGGTG CCAACCCGCA GCCACTCCTT CTCCGATGAC
GTGAACTACG CTATCGCCAA GGCATTGGAT GCGGACGTGA TTTTCATTGC CACCCCGGGT
AACGACACCC CGAACGCGCT GATGAACCGT TTGGAAATTG CCTACAACAG CTGGGGCGGC
GCCAAGAACA AACGCCTGAT TGGCGCCGTG ATCAACAAGA TTGGTGCACC TGTGGATGAC
GAAGGCCGCA CCCGACCTGA CTTGTCTGAA GTGTTCGACC ATCAGGACAT CCAGAAAGGT
GATGCCACGG CCATGTTCCA GCTGCCAGGC AAGAGCAAGC TGCGTATTCT GGGCAGTGTG
CCTTACAATC TGGATCTGGT GTCTCCCCGC GCATCAGACC TTGCCAAGCA CTTGCATGCA
CGCATCCTCA ATGCCGGTGA AATGAACACC CGTCGCCTGC GTAAAGTGAC CTTCTGTGCC
CGCTCCATTC CCAACATGCT GAGTCACTTC CGTACCGACT CGCTGCTGGT GACCTCGGGC
GACCGCTCCG ATGTGATTGT GGCAGCCTGC CTTGCGGCGA TGAATGGCGT GAAGATTGGC
GCGCTGCTGC TTACCGGCTC CTACGAGCCA GAGCCGGAAG TACTGAAGCT GTGCGAACAG
GCATTCGAGA CCGGTCTGCC GGTGTTTATG ATAGACACCA ACACCTGGCA AACCTCACTC
AATATTCAGC GCTTTAACCA CGAAGTGCCC GTGGACGATG CAGTGCGAAT TGAGCTGGTG
CAGGAATATG TGGCAAGCCA CATCGACCAG AGCTGGATTG AAAGCGTGAC CGAAAACTCG
CCACGCGAAC ACCGCCTGTC GCCACCGGCC TTCCGCTACA AGCTTACTGA GCTGGCCCGC
GCCGCCAAAA AGTGCATCGT ACTGCCTGAA GGCGACGAGC CACGCACCAT CAAGGCCGCC
AGCATCTGTG CCGAGCGCGG CATCGCCCGC TGTGTACTGC TGGGTAAGAA AGACGATATT
TTACGTATTG CCGCAGCACA GGATGTGGTG CTCGGTGAAG GTGTGGAAAT TCTCGACCCA
GAGGATATTC GCGAGCAATA TGTTGAGCCC ATGCTCAACC TGCGTCGCCA CAAAGGACTT
ACCGAAGTGG TTGCCCGTGA GCAACTGGAA GACAACATGG TACTGGCGAC CATGATGCTG
GCCGAAGATG AAGTGGACGG CATAGTATCA GGCGCGGTAA ACACCACCGC CAATACCATT
CGTCCACCGC TGCAGCTGAT TAAAACCGCC CCCGGCTCAA GCCTGGTATC CTCAATCTTC
TTTATGCTGA TGCCGGATCA GGTGCTGGTA TACGGTGACT GCGCCATTAA CCCGGATCCG
AACGCCGAGC AACTGGCCGA TATCGCCATT CAGTCGGCAG AGTCTGCCAA GGCCTTCGGC
ATTGAGCCCC GTGTCGCCAT GATAAGCTAC TCAACCGGTA ACTCGGGCAC GGGCTCCGAT
GTGGACAAGG TTCGCGAAGC TACTCGCATT GCCAAAGAGA AACGCCCCGA TCTGGTTATC
GATGGCCCGC TGCAGTATGA CGCGGCCGTG ATGCCAAACG TGGCCCGGTC CAAGGCACCC
GACAGCCCTG TGGCCGGTAA GGCTACCGTG TTTGTGTTCC CCGATCTCAA CACGGGTAAC
ACCACCTATA AAGCCGTACA GCGAAGCGCT GAGCTTATCA GTATTGGCCC TATGCTGCAG
GGCATGAGAA AGCCGGTGAA CGACCTGTCC CGCGGCGCCT TGGTAGACGA TATCGTCTAC
ACCATCGCCC TGACCGCTAT TCAGGCGACG CAGCAGTAG
 
Protein sequence
MSRNIMLVPI GTGVGLTSLS LGMVRALERH GVKVQFFKPI SQQRPADSGP ERSTTILSKS 
PTVNPLEPFD MQHAESLIRT DQTDVLMEQI IARASEIAAN TETLIIEGLV PTRSHSFSDD
VNYAIAKALD ADVIFIATPG NDTPNALMNR LEIAYNSWGG AKNKRLIGAV INKIGAPVDD
EGRTRPDLSE VFDHQDIQKG DATAMFQLPG KSKLRILGSV PYNLDLVSPR ASDLAKHLHA
RILNAGEMNT RRLRKVTFCA RSIPNMLSHF RTDSLLVTSG DRSDVIVAAC LAAMNGVKIG
ALLLTGSYEP EPEVLKLCEQ AFETGLPVFM IDTNTWQTSL NIQRFNHEVP VDDAVRIELV
QEYVASHIDQ SWIESVTENS PREHRLSPPA FRYKLTELAR AAKKCIVLPE GDEPRTIKAA
SICAERGIAR CVLLGKKDDI LRIAAAQDVV LGEGVEILDP EDIREQYVEP MLNLRRHKGL
TEVVAREQLE DNMVLATMML AEDEVDGIVS GAVNTTANTI RPPLQLIKTA PGSSLVSSIF
FMLMPDQVLV YGDCAINPDP NAEQLADIAI QSAESAKAFG IEPRVAMISY STGNSGTGSD
VDKVREATRI AKEKRPDLVI DGPLQYDAAV MPNVARSKAP DSPVAGKATV FVFPDLNTGN
TTYKAVQRSA ELISIGPMLQ GMRKPVNDLS RGALVDDIVY TIALTAIQAT QQ