Gene Sama_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1493 
Symbol 
ID4603745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1806858 
End bp1807295 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content51% 
IMG OID639780843 
Producthypothetical protein 
Protein accessionYP_927370 
Protein GI119774630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000411301 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCAT TTTTGTTGGT CGTGTTTTTC ATTCTTGCAG GTTGCAACGA ATCCGTTGAA 
AGCGCCACAA GCCCAAATCT GACACCGGAG CAGGTTAGCC TCGGCTTTTT CAGTGCCATC
TACGTTAACC GCGATGTGGC GGAGGCCAAA CGCTTTGTGG ACGCCCCCAT GCAGGAAGTG
CTCGGTCACT ACCATATTGC CGCCTCGGTG CAGCGGCATA TGCTGAACCT GTCAATGACG
GATGTGGAGT TGGAAATCGA AGAAATCGAT ATCGACTTTT TTCGCAAATT CACCGACGAC
GTCACAGTCA AGGTCAAGAT AAAGGGGCTC AAAGGTGGCC AGCCCTGGCT GGATGACAGA
ACGGTAAGAC TGAACAAGCG CGGAAAAAAC TGGGTCATTG TTGAGATAAT GACCGAAAAA
CGCGCCGCAA ATGGCTGA
 
Protein sequence
MRAFLLVVFF ILAGCNESVE SATSPNLTPE QVSLGFFSAI YVNRDVAEAK RFVDAPMQEV 
LGHYHIAASV QRHMLNLSMT DVELEIEEID IDFFRKFTDD VTVKVKIKGL KGGQPWLDDR
TVRLNKRGKN WVIVEIMTEK RAANG