Gene Sama_1491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1491 
Symbol 
ID4603743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1804939 
End bp1805865 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content55% 
IMG OID639780841 
Producthypothetical protein 
Protein accessionYP_927368 
Protein GI119774628 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000879827 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCTT TTATCGACTT TTTAGCGACG GCCGAATTAC CGCAAGACTG CCGACGTCTC 
TTTCACGGTC GCGGAGGCCG TTACCCCGGC GCAGAGCACC TGTGTCTTGA CTGGTATGCA
CCGGCGTTGC TGCTGACCTC GTTTTGTGAA CTCAGTGCCG ATGAGCTGGC GACTGCAAAA
GCTGCGTTGG AGACGTTTTG GCAGCGTGTA GGCAAAGCTG CTCCCCTGAT ATTGGTATAT
CAGTATCGCA GTGGCGCCGG TACCCGCACT GAATGCCTCT GCGGTGAGTT GCCAGACAGT
CATGTGATTG AGGAGCAGGG ACTTAAGTTT TTGGTGCACT TGATGCGTGG CCAGAATCAC
GGGCTATTTC TCGATATGCG CGAAGGTCGC CGCTTTGTAC ATGAGCATGC CAGGGGAAAG
AAGGTACTGA ATCTCTTCAG CTACACCTGT GCCTTTTCGG TGGCGGCCCT GGCTGGAGGC
GCGACCGAGG TAGTGAATAT CGACATGGCA AAGGGCGCAC TTTCCATTGG TAAACAAAAC
CATGACCTCA ATGGTCTGGT GGGGGGCGCT CGATTTCTCG GCCACGATAT CTTCAGTAGC
TGGGGTAAGC TGACCCGTTA CGGCCCCTAC GACCTGGTGA TTGCCGATCC ACCCAGCAAC
CAAAAAGGCA GTTTTATCGC CACCAAAGAT TATGTGCGCT TACTGAGGCG CTTACCTGAG
CTGGTAAAAG AAGGCGGCGA CCTGTTGCTA TGTCTGAATG CCCCTGAGCT TGGGAGTAAT
TTTTTGATGT CACAGGTCGA CGAGACGGCA CCCTCCCTGG CGTTTGTAAC ACGTATCGCC
AATCCTGCCG TGTACGCCGA CGTGGATGAG GAGAAATCCT TGAAGGTGCT GCACTATCGA
AAGTGTACAC CCGCAATCGA CGCCTGA
 
Protein sequence
MQAFIDFLAT AELPQDCRRL FHGRGGRYPG AEHLCLDWYA PALLLTSFCE LSADELATAK 
AALETFWQRV GKAAPLILVY QYRSGAGTRT ECLCGELPDS HVIEEQGLKF LVHLMRGQNH
GLFLDMREGR RFVHEHARGK KVLNLFSYTC AFSVAALAGG ATEVVNIDMA KGALSIGKQN
HDLNGLVGGA RFLGHDIFSS WGKLTRYGPY DLVIADPPSN QKGSFIATKD YVRLLRRLPE
LVKEGGDLLL CLNAPELGSN FLMSQVDETA PSLAFVTRIA NPAVYADVDE EKSLKVLHYR
KCTPAIDA