Gene Sama_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1485 
Symbol 
ID4603737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1798568 
End bp1799155 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content54% 
IMG OID639780835 
Productarylesterase 
Protein accessionYP_927362 
Protein GI119774622 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCTT TGCTGGCCTG CCTGGTCCTG GCGTTCCCCC TGAAGGCCGA AACTATATTA 
ATCCTCGGTG ACAGCCTGAG TGCAAGTTAC GGTATGGAAG AAAACCAAGG CTGGATCAAT
TTGATGCGCC CTCAATTGCC ATCCCATACC CTGATTAATG CCGCCGTGAG CGGCGAAACC
AGCGCCGGTG GTCTGCGCCG ATTGCCCGCC CTGCTTGACT CTGCCAAACC TGAGCTGGTG
TTTGTGATGT TGGGGGGGAA TGACGGCCTG CGGGGATTTT CACCCACAGA GCTGAAAAAG
AATCTTACAA AAATCATTGA CCTGAGCATA GCGTCCGGCT CCAGGGTACT CTTAAGCGAA
GTCATGGTAC CCACCAATTA TGGTGGTCGC TACGCCAAGG CATTTGCTGA CGTCTATCAA
GAGTTGGGAA CCCGTGAAGG GGTTACCCTG ATGCGGTTTT TCATGACAGA CATCATTATT
GACCCGACCC TGATGCAACG GGATGGTATA CATCCCAACG AAGCGGCGCA GCCAAAGATA
GCCGAGATTA TGCTGCCCTA TTTCAGCAGC GCACTTACCG CCAAATGA
 
Protein sequence
MAALLACLVL AFPLKAETIL ILGDSLSASY GMEENQGWIN LMRPQLPSHT LINAAVSGET 
SAGGLRRLPA LLDSAKPELV FVMLGGNDGL RGFSPTELKK NLTKIIDLSI ASGSRVLLSE
VMVPTNYGGR YAKAFADVYQ ELGTREGVTL MRFFMTDIII DPTLMQRDGI HPNEAAQPKI
AEIMLPYFSS ALTAK