Gene Sama_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1484 
Symbol 
ID4603736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1797325 
End bp1798458 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content54% 
IMG OID639780834 
Producthypothetical protein 
Protein accessionYP_927361 
Protein GI119774621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATCAT CCCCAATCCG CATCAGCCAT GCCCCGCAGG CATCCACTGT GGCCAACGGC 
ATTGCCAATC CCAATTTGGC CTGTCTGCTC GCCATCGCCG CAATTTTTAC GCTGCAAACG
CCGCTGGCTC AGGCCTCGCC TCCGCCCTTT GAAGTCGCGG TAGACAGCCA ATACGATTGG
CTGCTTTTGT CTTCCAATGA GTTGCTCAAA GGGGAAATCA AGCATCTTTA CGATGACAGA
TTGGAGTTTG AAAGCGATAA ACTCGACACC CTGATTATCG ACTGGGAAGA CATCAAGGCC
CTGAAAAGTG CCGGGACCCT GTCGGTGGGT CTGGTGGACC TGAGCACACT GACAGGTCAG
CTTGAAATCC GTAATCAATC GGCCTGGCTC GATGGTAAAC CCTTCCCACG CAGTCAAATC
CTGACCATCA TCCCCGGTGT GCAGCGTGAA GCAAACTATT GGTCGGCCAA AGTGTCCCTC
GGTGCCAATC TGCGTTCGGG TAACACCAGT CAGGTGGATT ACAGCGCCAG CGCCTCCATT
AAACGGCGAA CAACCGAATC GCGCCTGAAC AGCGACTACA TTGGCAAGTA TTCCAAGAGC
GAAGGCGAAA ACACGGTAAA CAACCACAGG CTGGCGGGTA ACTTCGACTG GTTTATCTCA
AAGCGTTTCT ATCTGCGCCC GGTGTTTGTG GAGTATTACC GCGACCCATT TCTCAATATC
GACACCAAGC TGACCCTGGG GGCCGGTGTG GGGTACGATC TTATCGACAC AACCAAAACC
GAATGGACCA TAGGCGGCGG TCCGGCCTAC AGTTATACCC GCTTCGTTGA GGTGGGAGCC
GGCGAGCCTG AAGATGAAAG CTCAGCGGCA CTGGTATTGG ATACCCGCTT CGAGCACGAA
CTGACCGACG ATATCGACTT CACTGCCCGC TACCAGATGC TCTATGGCAG CGAAGCCTCC
GGGGGCTATT CCCACCATGC ACTCACCGGC TTTTCCATCG ATTTAACCGA TATCTTTGAT
TTGGATGTGT CCCTGGTGTG GGACAGAACC AACAAACCCA AGGCGGATAA TGACGGCGCA
ATCCCCAAGA GTAACGACTA CCAGCTGATT ATCGGATTTG GCATCGATTT GTGA
 
Protein sequence
MKSSPIRISH APQASTVANG IANPNLACLL AIAAIFTLQT PLAQASPPPF EVAVDSQYDW 
LLLSSNELLK GEIKHLYDDR LEFESDKLDT LIIDWEDIKA LKSAGTLSVG LVDLSTLTGQ
LEIRNQSAWL DGKPFPRSQI LTIIPGVQRE ANYWSAKVSL GANLRSGNTS QVDYSASASI
KRRTTESRLN SDYIGKYSKS EGENTVNNHR LAGNFDWFIS KRFYLRPVFV EYYRDPFLNI
DTKLTLGAGV GYDLIDTTKT EWTIGGGPAY SYTRFVEVGA GEPEDESSAA LVLDTRFEHE
LTDDIDFTAR YQMLYGSEAS GGYSHHALTG FSIDLTDIFD LDVSLVWDRT NKPKADNDGA
IPKSNDYQLI IGFGIDL