| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1477 |
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| Symbol | |
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| ID | 4603729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1786054 |
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| End bp | 1788897 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780827 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_927354 |
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| Protein GI | 119774614 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA AAGCGTCCCT GGTCGCTCTG GCGTTGGCGG GTGTCTCTGC CAATGTCTTT
GCCGCCGACA ACCTCGTCAT TTCTGAATAT GTCGAAGGTT CCAGCAACAA TAAAGCCATT
GAACTCTACA ATCCAACCGC GGCCGCGGTA GACCTGAGCC AATATCAGCT TAAGTTTTAC
TTTAACGGCA ACAGCACCGC TGGCAGTAAC ATTGCCCTCA GTGGGATCCT GGCCTCGGGT
GCCACCTTTG TGGTTGCTGA CAACGATGCC AGCGCCGATA TTTTAAACCG CACCCAACTT
GCCAGTAACG CCAGTTTTTT TAACGGTGAC GATGCCATAG TACTGGAACA CCTTGGCAGT
GTTATCGACA GCCTCGGCCA GATTGGTGTG GACCCCGGCA GCCAGTGGGG CAGCGGTTTG
TTGTCCACTG CCGACAATAC CCTGCGCCGG GATGGGGCCA ACCTGGTTGC CGACACAGAT
CCATACGATG CGGTAACCCT GAGCAACTGG ATTGGTTTTG CTCAGGATGA TTTCTCCAAT
CTGGGCCAGT TTTCCAGCGG CCCAACCGAT CCGACTGACC CGACCGATCC CACTGACCCA
CCGGCAGAAG GCATGGTGTG CGGTACTTCT GCCACCGCCA TTCACAGTAT TCAGGGCGCA
GGCACAACAA GCCCCATGGT CGGCCAAATA GTGGAAGTGG AAGCCGTAGT GGTGAGCAAT
CAGGAGGCTG GCCTCAAGGG CTTATTCCTG CAAATGGCCG ACGCCGAGCA AGACAGCGAT
GTACAAACTT CTGAAGGGGT ATTCCTGTAT ACCGGTAACG CCCCCACTGG CTATCTGGTG
GGTGATCGGG TTCGCGTTAA AGCCAAGGTC GTGGAGTATC AGGGCCTGAC CGAGCTGACC
AACCTCACCG ACAAGACGCT TTGTGCCACG GCTCAGCCGC TGCCAACGGC CGCCGCCCTC
AGCCTGCCGG TAAACGATGT GACTGAGCTT GAAGCCTTTG AAGGCATGCT GGTTAACTTC
AGCCAGAATC TGGTGGTCAA TGAGGTTTAT AACCTGGGCC GCTACGGCGA AATCATGCTG
GGTGGCCGTC GTCACGTTAT TGGTACTCAG GTCGCGGCCC CCGGCGCCGA TGCCCTGGCT
GTAACCGCTG CCAACCAGCG TGACAGCATT TTGTTGGACG ATGGTCTCAC CAGCCAGAAC
CCCGACCCTG TTATCTATCC TGCGCCGGGT CTGAGCGCCA CCAACACAGT GCGTGTGGGT
GATACTGTGA CCAACCTGAC AGCCGTGATG CACTATGGTT TTGGCGTATA CCGCCTTATG
CCGCTGGATA CAGTTAACTT TGTTGCCAGT AATCCGCGCA CCGATGCACC GGCGCTGGAT
GCCGGTAACC TCAAGGTCGC CAGCTTCAAC GTGCTTAACT ACTTCAATGG TGATGGCCTG
GGCGGCGGTT TCCCCACCGC GCGCGGTGCC AATACCGCCG TGGAATTTGA GCGTCAGCGA
GCGAAAATCA TCAGTGCCAT GAAGGCCATC GATGCCGATA TATTGGGCTT GATGGAAATC
GAAAATGATG GTTTCGGCAG TGAGTCTGCC ATTGCCGACC TGGTCAACGG CCTCAATGCC
GCTACAGAAG CGGGCCGCTA CGGCTACATT GACCCGGCGG TGCCAGCGAT TGGCACAGAT
GCCATCAGCG TCGGTATCAT CTACCGCACT GACAAGGTGA CGCCGGAAGG CGCTGCCGCC
ATCCTCGACA GCAGCAACTC GGCTGTGGAT GAAGATGGCA AGGTTCTGTT TAACGACCAG
AAAAACCGCC CCATGCTGGC ACAGGCGTTC CGTCATCTGG AAACCGATGA GCCAGTCGTA
GTCGCCGTCA ATCACTTCAA GTCCAAGGGC AGTGACTGTG TTGCTGAAAA TGACCCGGAT
CTGGGTGATG GCCAGGGCAA CTGTAACCTG ACCCGCACCC GCGCCGCCAA AGCCGTGGGT
GAGTTCCTGA ACACCGAGTT TGCTGACGCC CCGGTTCTGG TGATTGGTGA CCTTAACTCC
TACGCCATGG AAAACCCACT GACGGCATTG AATGAAGCCG GACTGACCGA ACTCTTTGCT
CATCTGGGCA AAGAATCGGC CTACTCTTAT GTGTTCTCCG GTGAGTCTGG TCAGCTCGAC
CATGCACTGG CGAATGTTGC CTTGCTGGAG AAAGTGGTGG ATGTGACCGA ATGGCACATC
AACACCGACG AGCCACGCAT TCTTGACTAC AACGTCGAGT TCAAGAGTGC AGGGCAGGTG
GAGTCCCTCT ACAGCATGGA TGCCTATCGT TCATCGGATC ACGACCCTGT GGTGATTTCA
CTGGAGCTGG AACGCGCCAA TGAACTGCCT GTTGCCAACT TCAGCTATCA GGTACGTGGT
CGCAAGGTGG CGTTCGTGGC CAATGCCACC GATGCCGATG GTGGCATTAA TGCCATTCAC
TGGAACTTTG GTGATGGCAC CGAGGCCATG GGGGATGCGG TTGAACACAA GTTTGCCAAC
CGCGGTGTGT ATCAGGTGAG CCTGACCGTG ACCGATAATC TGGGTGGCAG CACCACTGTG
ACTCAGCAGG TTGGGGTTGG CGTCAACGCC GACAACAAAG CGCCTGTGGC TGCCATCGAG
CATCTGGACT TTGGTCTGTT TCACCTCTTT GTATCAGCGA GCTACGATAC CGATGGCCGT
ATCCGCAAGC AGCTGTGGCA GTTTAACGAC GGTGCCCGTT TCGCAAGCTC CGTGGTGCTG
CGCCGCGCTG GCAGCGCCAG TGAGGTTAAC CTCACAGTGA CTGACAACGA TGGGGCGACT
GACAGCACCA GTCTGCGCTT TTAA
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| Protein sequence | MKTKASLVAL ALAGVSANVF AADNLVISEY VEGSSNNKAI ELYNPTAAAV DLSQYQLKFY
FNGNSTAGSN IALSGILASG ATFVVADNDA SADILNRTQL ASNASFFNGD DAIVLEHLGS
VIDSLGQIGV DPGSQWGSGL LSTADNTLRR DGANLVADTD PYDAVTLSNW IGFAQDDFSN
LGQFSSGPTD PTDPTDPTDP PAEGMVCGTS ATAIHSIQGA GTTSPMVGQI VEVEAVVVSN
QEAGLKGLFL QMADAEQDSD VQTSEGVFLY TGNAPTGYLV GDRVRVKAKV VEYQGLTELT
NLTDKTLCAT AQPLPTAAAL SLPVNDVTEL EAFEGMLVNF SQNLVVNEVY NLGRYGEIML
GGRRHVIGTQ VAAPGADALA VTAANQRDSI LLDDGLTSQN PDPVIYPAPG LSATNTVRVG
DTVTNLTAVM HYGFGVYRLM PLDTVNFVAS NPRTDAPALD AGNLKVASFN VLNYFNGDGL
GGGFPTARGA NTAVEFERQR AKIISAMKAI DADILGLMEI ENDGFGSESA IADLVNGLNA
ATEAGRYGYI DPAVPAIGTD AISVGIIYRT DKVTPEGAAA ILDSSNSAVD EDGKVLFNDQ
KNRPMLAQAF RHLETDEPVV VAVNHFKSKG SDCVAENDPD LGDGQGNCNL TRTRAAKAVG
EFLNTEFADA PVLVIGDLNS YAMENPLTAL NEAGLTELFA HLGKESAYSY VFSGESGQLD
HALANVALLE KVVDVTEWHI NTDEPRILDY NVEFKSAGQV ESLYSMDAYR SSDHDPVVIS
LELERANELP VANFSYQVRG RKVAFVANAT DADGGINAIH WNFGDGTEAM GDAVEHKFAN
RGVYQVSLTV TDNLGGSTTV TQQVGVGVNA DNKAPVAAIE HLDFGLFHLF VSASYDTDGR
IRKQLWQFND GARFASSVVL RRAGSASEVN LTVTDNDGAT DSTSLRF
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