Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1474 |
Symbol | |
ID | 4603726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1783169 |
End bp | 1784260 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639780824 |
Product | hypothetical protein |
Protein accession | YP_927351 |
Protein GI | 119774611 |
COG category | [S] Function unknown |
COG ID | [COG4984] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGGAA ACGCAGCGCC ACCCGATAAA CCCACTGGTG TGGAGTCCAA ACTTTTTCCG GCGTCTCCCT CTGTTCGTGC CCAGTTGGCA CAGTGGCTCG ATGACGGATA TTTGCGCAAG GGAGCCCTGT CGCAATTGCC CCCGCTGGTG GAAGCCTGTG AGTCCCGGGC TCCACAAAAC TGGTTAACGC CGCTTTACAC CATGATGCTG TACCTGGGCG CCTTGTTGCT GGGGGCCGGG ATCATTTTCT TTTTTGCCTA CAACTGGGCG AATCTGCACC ACTTTGCCAA ATTTGTCCTG GTGGAAACGG CCATCGCATT TACTGTGTGC GGGCTGTATC CGGTGAGTCG GTTAGCGCCG GGAAGACAGG TGTTTCACTG GCTTACGGGG GCCCTGTTAC TGCTGCTGGA CCTGTTGGTG GGCGCCCTGT TGGCGCTGGT GGGGCAGGTG TATCAAACCG GCGCCGATCC CTGGCAGCTC TTTGCCATTT GGGCTGCCTT TACCTTGTTG CCCGCACTGG TATATCGCAG CGATTTGCTC TGGAGCGCCT TTTGGGCCCA GAGCAATCTG GCGCTGTGGC TTCATTTTGC CCATCTTGGT GCCATCTTGG GCATTGTGGT TGATGTCGGT TGGGCGATGC TCATTATTGC TGTCTGTAAC CTGGGCCTGC ACTGGCTACT TGAAGTCGGA CAAAGACGCA AGTTGCCCGT TTTTGCCCAT ACGTTCACCA ATACGCTTGC CCTTACGGCG GGGGTGACCG GCCTTGCCTG GTACGGCGCT TATCACATCC TGGATACCCG CCTTGGCTGG CAACATGGTG CGCTCTTGGT GGCACTGCTG GCGCTGGTGC CGCTGATTTA TCTTGTTTAC CGCAGATGGT GCCTGAGGAT TACGGCGCTT GGCATATGGG GATTTGTCGT TATCGCCGAG TCGAGCATCT TGCTTGCGCG GGTTCTGTTT GAGGGCAGCG AGCCGGTGGG GAGTTTCTTG CTGGTGGGCT GCTATGTGAT TGGCTGTAGC AGCGGCCTTG CGATTTATCT CAAGGGTCTT CTTCGGGAGG AAAAGATGCA GGAGATGCAA CATGGTGGAT AA
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Protein sequence | MQGNAAPPDK PTGVESKLFP ASPSVRAQLA QWLDDGYLRK GALSQLPPLV EACESRAPQN WLTPLYTMML YLGALLLGAG IIFFFAYNWA NLHHFAKFVL VETAIAFTVC GLYPVSRLAP GRQVFHWLTG ALLLLLDLLV GALLALVGQV YQTGADPWQL FAIWAAFTLL PALVYRSDLL WSAFWAQSNL ALWLHFAHLG AILGIVVDVG WAMLIIAVCN LGLHWLLEVG QRRKLPVFAH TFTNTLALTA GVTGLAWYGA YHILDTRLGW QHGALLVALL ALVPLIYLVY RRWCLRITAL GIWGFVVIAE SSILLARVLF EGSEPVGSFL LVGCYVIGCS SGLAIYLKGL LREEKMQEMQ HGG
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