Gene Sama_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1465 
Symbol 
ID4603717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1775050 
End bp1775670 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content57% 
IMG OID639780815 
Productacetyltransferase 
Protein accessionYP_927342 
Protein GI119774602 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.891566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCAAG GAACCCCAAT GTTGAATGTC ACTGCGCCGC AGCTATCCGG CGAGCTTGTC 
GTCCTGGAAC CCCTCAGCCT AAATCATGTC CCGGCACTGC AATTGGCGGC CGCCGACGGC
AAGCTGTGGG AGCTGTGGTT TACCAGTGTG CCTGACCCTG ATGGTGTAAA GGCGTACGTC
GAGAAAGCGC TGGCGCAGCA AGCGCAGGGC AGTGCGATTC CCTTTGCCGT CAGGGCGCGT
CATAGTGGCG AAGTGGTGGG CTGTACCCGT ATTTGTAACC GGGTATTGGA GCACAGACGG
GCGGAAATTG GTTACACCTG GTATGGCAAG AGTGTGCAGC GCAGTGGCAT CAACACAGAG
ACCAAGTTGC TGCTGCTCGA TTACTGCTTT AGCGAACTCG ATTGCATCGC CGTTGAGTTT
CGAACTCACT GGCATAATCA GGCCTCCCGA GAGGCCATCG CCCGTTTGGG TGCGAGACAG
GACGGTGTGC TGAGAAATCA CCAAATCCTC AAAGACGGCA CCTTGAGAGA CACAGTGGTG
TTTTCGCTGT TGGATTCAGA GTGGCCAGCA GCGCGCAAGC ACTTGCGGTT TCGCCTGGCA
CGGCACGCCA GCGAGTTATA A
 
Protein sequence
MYQGTPMLNV TAPQLSGELV VLEPLSLNHV PALQLAAADG KLWELWFTSV PDPDGVKAYV 
EKALAQQAQG SAIPFAVRAR HSGEVVGCTR ICNRVLEHRR AEIGYTWYGK SVQRSGINTE
TKLLLLDYCF SELDCIAVEF RTHWHNQASR EAIARLGARQ DGVLRNHQIL KDGTLRDTVV
FSLLDSEWPA ARKHLRFRLA RHASEL