| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1448 |
|---|
| Symbol | |
|---|
| ID | 4603700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 1759077 |
|---|
| End bp | 1759430 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639780798 |
|---|
| Product | HIT family protein |
|---|
| Protein accession | YP_927325 |
|---|
| Protein GI | 119774585 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAG AAACCATTTT CAGCAAAATA ATCCGCCGCG AAATCCCTGC CGATATCCTG
TACCAGGATG AACTGGTCAC CGCGTTTCGC GATATCGCCC CCAAGGCGCC GACCCATGTG
TTGATAGTAC CCAATCATCT TATTCCCACT GCCAATGATG TGAAGGCATC GGATGAGCTC
GCGCTTGGCC GTATGTTTAC TGTGGCCGCC AAGCTCGCGG ACGAAGCTGG CATTGCCAAA
GATGGTTATC GACTCATCAT GAACTGCAAC AGTCACGGTG GCCAGGAGGT GTACCATATT
CACATGCACC TGGTGGGCGG CGAGCCTTTG GGCCCAATGC TTGCCCAGCG TTGA
|
|---|
| Protein sequence | MAEETIFSKI IRREIPADIL YQDELVTAFR DIAPKAPTHV LIVPNHLIPT ANDVKASDEL
ALGRMFTVAA KLADEAGIAK DGYRLIMNCN SHGGQEVYHI HMHLVGGEPL GPMLAQR
|
|---|
| |