| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1447 |
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| Symbol | |
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| ID | 4603699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1757126 |
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| End bp | 1758889 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780797 |
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| Product | protease, putative |
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| Protein accession | YP_927324 |
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| Protein GI | 119774584 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.747842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGTT ACAGCATTAT TCCAAGTGAT CCCAAAGCTC ATCTGTTTGA GGTCAATCTG
GAGATCCCAA CCCCAAGTGT TAACCAATTG CTTTCGTTGC CAGCCTGGAT CCCGGGCTCG
TATATGGTGC GTGACTTTGC CCGCAATCTG ATTGGAATCA AAGCCTGGCA AGCGAATAAC
CCCGTCGCTC TGACTCAACT CGATAAACAA CGTTGGCAAG TGGAAAACCG CTCAACAGAG
CCGCTGCGCC TGTCATATCA GGTGTACGCA TTCGACCTGT CGGTACGCAG TGCACATCTG
GATATGACCC ATGGTTTTTT CAATGGCTCC AGTGTGTTTC TGGCGGTAGA AGGCCAAACC
GACGGACCGC TGTGGGTTGA GATTCAGACG CCGACCGAGA TTGCCCTCAA TCATTGGCGA
GTGGCGACAA CCCTGCCAAG ACGCAGCGGC GATGCCTGGC AGTTTGGCGC CTTTGAAGCC
GAAAACTATG ACGCCCTTAT CGACCACCCG GTAGAAATGG GTGACTTTAC CCAGGCAAGT
TTTGAGGCCT GCGGCGTGCC CCACCACATA GTGCTGACCG GCCGCCATCG CTGCGATATG
GAGCGCCTTT GCCAGGATTT AAAAGCCATC TGCGAAACGC AAATACAGCT GTTTGGTGCG
CCAGCCCCCT TTGATGAATA CCTGTTTATG ACCATGGTAT TGGACAATGG CTTTGGCGGA
TTGGAACACC GCAGCTCAAC GGCACTGGTG TGCTCACGTA AAGATTTGCC GCTGTCCATG
GACGACAAAG TCAACAAGGA CTATCGCACT TATTTATCCC TGTGCAGCCA TGAGTATTTC
CACAGCTGGA ACGTTAAGCG GATTAAACCC GCTACCTTTA TCCCCTATTC GCTGGAGAGT
GAGAGCTACA CCCGGCAATT GTGGGCTTAC GAAGGACTGA CGTCTTACTA TGACGACCTG
CTGACGCTTA AAGCGGGCAA AGTCGATACC GAAACCTACC TGGACATGCT CAGTGAAACC
ATGACACGGG TATACCGGGG TGTGGGCCGT TTCAAACAAA GCCTCAGGGA TTCGAGCTTT
AATGCCTGGA CCAAGTTTTA CAAACAGGAT GAAAATGCCC AAAACGCCAT CGTAAGCTAT
TACACCAAGG GCGCACTCTT CGGCCTGTAT CTCGATCTTG TCATCCGCAA GGAAACCGCA
GGTAAGGAGA GCCTGGACTC CCTGATGCGC CTGTTATGGG AGCGTTTTGG ACTGACCGGA
CAGGGAACTG ACGAACACAG TCATCAGGCT CTGGTAGCAG AGCTGCTTGG CCGCGATGTG
AGCGATATTT TCGCCTATTT GGATAACACG GACGACTTAC CCCTCGCCCC GCTGCTTGCC
GAGTTTGGTG TTCACATGGC GCTCAGGGCC GCAAGCGGTC AAAACGACAC CGGGGGCGGA
AAACCTTCGC CACTGACACT GTCTCTTGGT GCCAAATTCA AGGCAGAGCC ATTGGGGGTA
AGAATTCAAA CGGTGGCAGA ATCCAGCAGT GCACATCTGG CCGGTTTATC GGCTGGTGAC
TTACTGATTG CCATCGATGG GCTTCAGGCC ACGGCCAATC TTGAAAACGT GCTTAACAGT
TACAATGAAG GCGATGAGCT GGCGCTGCAT TTCTTCCGCC GCGACGAATT GATGACTGCC
AAATTACGGC TTCAGGCAGC CCCTCTGGAT ACAGTGTCGC TGCATCTGGA AGATGCCACT
GCGATAGCGG CCTGGCTCGG GTAA
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| Protein sequence | MIRYSIIPSD PKAHLFEVNL EIPTPSVNQL LSLPAWIPGS YMVRDFARNL IGIKAWQANN
PVALTQLDKQ RWQVENRSTE PLRLSYQVYA FDLSVRSAHL DMTHGFFNGS SVFLAVEGQT
DGPLWVEIQT PTEIALNHWR VATTLPRRSG DAWQFGAFEA ENYDALIDHP VEMGDFTQAS
FEACGVPHHI VLTGRHRCDM ERLCQDLKAI CETQIQLFGA PAPFDEYLFM TMVLDNGFGG
LEHRSSTALV CSRKDLPLSM DDKVNKDYRT YLSLCSHEYF HSWNVKRIKP ATFIPYSLES
ESYTRQLWAY EGLTSYYDDL LTLKAGKVDT ETYLDMLSET MTRVYRGVGR FKQSLRDSSF
NAWTKFYKQD ENAQNAIVSY YTKGALFGLY LDLVIRKETA GKESLDSLMR LLWERFGLTG
QGTDEHSHQA LVAELLGRDV SDIFAYLDNT DDLPLAPLLA EFGVHMALRA ASGQNDTGGG
KPSPLTLSLG AKFKAEPLGV RIQTVAESSS AHLAGLSAGD LLIAIDGLQA TANLENVLNS
YNEGDELALH FFRRDELMTA KLRLQAAPLD TVSLHLEDAT AIAAWLG
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