| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1439 |
|---|
| Symbol | |
|---|
| ID | 4603691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 1749546 |
|---|
| End bp | 1750703 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639780789 |
|---|
| Product | 8-amino-7-oxononanoate synthase |
|---|
| Protein accession | YP_927316 |
|---|
| Protein GI | 119774576 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00843226 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGGT TGCTGCATCG CCTGGCTGAG GCCAGAGTGA AAGCCGAATC GGCGGGGCTT
TGGCGTCAAC GTCAGCGCCA CAGCCCGGCT CTGATGGATT TTTCTGCCAA CGATTATCTG
GGGCTTGCCC GGGACGAGAG ACTCGCCGAG GCCTTGGCAG AGGGGGCCCG TCGTTATGGT
GTCGGCAGTG GTGCATCGCC ACTGGTGAGT GGCTACTCAG AGGCCCATGC CGAGCTGGAA
GCAGCCCTCT GCGCCGCAAC CGGCCATGAA GCTGCGCTGC TCTTTTGCTC GGGCTTTGCC
GCCAACCTGG CTTTGTGTCA TGCCCTGTTT GACAGCACCG ACACCCTGGT GGCCGATAAG
CTTATTCATG CCTCCATGAT TGACGGTATT CTTGGCAGTG GTGCCAACCT CAAACGCTAC
CCACATTGTG ACCTCAGTGG CGCGGCCCGC CTGATAGAGA GGTTCCCGGG TACTGCGCTT
CTCACCGAGA GTATTTTCAG CATGGATGGC GACCTGGCGC CTTTGTTACC ACTCTCCAAT
CTGTGTGAGT CCCATAACAG TTTGTTTATT GTCGACGACG CCCATGGGTT TGGCGTTATC
GGAGAGCAAG CTATGGGTGC CAGCAGGTTG GATGGGGTGA ATATCTCGCT CCAGCTGGTG
ACCTTTGGTA AGGCTCTGGG GTGCCAAGGC GCTGCGGTGC TTGGCAGTCA GGCGCTTATT
GAGAGTCTGG TGGCAAGCGC CAGGCATTAT ATTTATTCCA CGGCGTTATC CCCTGCTCAG
GCCCATGCAG CTCGCGTGTC GCTCTCTCTG GTTCAGCAGG GGGAAAAAAG CGCAACACTG
GCCGTGAATA TCCGCCACTT CCTGAACTGC GCCAAGGAAG TCGGCCTTGC TTTGCTGCCC
TCTCAAAGCC CAATTCAACT GATGCCCGTC CCTACTGTAC AGGCTTGCCT GATGGCAGCG
GATACTCTCA AGGCCCGAGG CTTTTTGGTG GGGGCAATTC GTCCCCCAAC GGTGCCGGCA
CCTAGGCTCA GAATAACCCT GAGTGCCGCC CAAAGCATGA ACAGTATAGA GGCATTGGTA
AACGCTCTGG CGGACATTGA AAAAGGCTTT GGCGAGGGCG TTAACGAATG CGTAGTCAAA
GGCAGTGATA AGCCATGA
|
|---|
| Protein sequence | MNRLLHRLAE ARVKAESAGL WRQRQRHSPA LMDFSANDYL GLARDERLAE ALAEGARRYG
VGSGASPLVS GYSEAHAELE AALCAATGHE AALLFCSGFA ANLALCHALF DSTDTLVADK
LIHASMIDGI LGSGANLKRY PHCDLSGAAR LIERFPGTAL LTESIFSMDG DLAPLLPLSN
LCESHNSLFI VDDAHGFGVI GEQAMGASRL DGVNISLQLV TFGKALGCQG AAVLGSQALI
ESLVASARHY IYSTALSPAQ AHAARVSLSL VQQGEKSATL AVNIRHFLNC AKEVGLALLP
SQSPIQLMPV PTVQACLMAA DTLKARGFLV GAIRPPTVPA PRLRITLSAA QSMNSIEALV
NALADIEKGF GEGVNECVVK GSDKP
|
|---|
| |