Gene Sama_1434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1434 
Symbolfur 
ID4603686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1745162 
End bp1745647 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content49% 
IMG OID639780784 
Productferric uptake regulator 
Protein accessionYP_927311 
Protein GI119774571 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000031646 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCA TTGTCCACAA AGAGCCCAAT GGTTCTGCAA TCAAGAGATT AACCATGACA 
GATGGAAATC AGGCGCTGAA AAAAGCGGGA TTGAAAGTTA CCCTGCCACG AGTAAAAATC
CTGGAGCTGA TGCAAGAACC AGAGAATCAA CACATCAGTG CCGAAGACCT GTACAAGAAG
TTGCTCGAGA TTGGTGAAGA GATTGGCCTG GCCACCGTGT ACCGGGTACT GAACCAGTTC
GACGATGCGG GCATCGTCTC CCGTCACCAC TTCGAAAGCG GCAAGGCCGT GTTCGAGCTG
TCAACCCAAC ATCATCACGA TCATCTGGTC TGTTTGAGCT GTGGCAAAGT GATTGAGTTT
TCTGACGATT TGATTGAACG TCGTCAGAAT GAAATTGCCA TGCGCCACAA CATTAAGCTC
ACCAACCACA GCCTGTATCT GTACGGCGTA TGCACCAACG ATACCTGTGA TCACGGCGAC
GAGTAA
 
Protein sequence
MISIVHKEPN GSAIKRLTMT DGNQALKKAG LKVTLPRVKI LELMQEPENQ HISAEDLYKK 
LLEIGEEIGL ATVYRVLNQF DDAGIVSRHH FESGKAVFEL STQHHHDHLV CLSCGKVIEF
SDDLIERRQN EIAMRHNIKL TNHSLYLYGV CTNDTCDHGD E