Gene Sama_1433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1433 
Symbol 
ID4603685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1744664 
End bp1745074 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content56% 
IMG OID639780783 
ProductGreA/GreB family elongation factor 
Protein accessionYP_927310 
Protein GI119774570 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000263626 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGAAC AACCCAAGAT TGTGATCTCC GAAATTGATA TGGAGCGTCT TGAACGATTA 
TTGGAAAGCC TGCCGGGGAA TGATGCCGGC AAGGTGGCAT TGGAAGCTGA ACTCAGCCGC
GCTGAGGTCA GACCGTCCAA GGATATGCCA GCCAATGTGG TGACCATGAA TTCCGAGGTA
CGCTTTACCG TGTCATCCTC GGCAGAAGAA TTTTGCCTGA GGCTGGTATA CCCAAAAGAT
GTGTCGGCCA AGGGGGACAC AGTCTCCATC CTCGCGCCGG TCGGCAGTGC TCTGCTGGGA
CTGGCCCAGG GGGATGAGAT GGACTGGCCC CGTCCCGGTG GCGGTACCAC CCGGGTCAGA
ATCGAAGAAG TGACTTATCA GCCTGAGCGC AGTGGTGACT TTCACCGCTG A
 
Protein sequence
MTEQPKIVIS EIDMERLERL LESLPGNDAG KVALEAELSR AEVRPSKDMP ANVVTMNSEV 
RFTVSSSAEE FCLRLVYPKD VSAKGDTVSI LAPVGSALLG LAQGDEMDWP RPGGGTTRVR
IEEVTYQPER SGDFHR