| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1429 |
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| Symbol | sucC |
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| ID | 4603681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1740653 |
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| End bp | 1741819 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780779 |
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| Product | succinyl-CoA synthetase subunit beta |
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| Protein accession | YP_927306 |
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| Protein GI | 119774566 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.185087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTGC ATGAGTATCA GGCAAAAGCC CTCTTTGCCG AATATGGTTT ACCAGTGTCA
GAAGGCTATG CCTGCGATAC CCCTCAAGAA GCGGTAGAAG CGGCCGGTCG TATTGGCGGA
AATATGTGGG TAGTCAAGTG TCAGGTGCAC GCTGGCGGCC GCGGTAAGGC TGGTGGCGTT
AAAGTGACTG GCGACAAAGA AGAAATCCGC GCCTTCGCTG AAAAGTGGCT GGGCAAGAAC
CTGGTGACTT ACCAGACTGA CGAAAACGGT CAGCCAGTTG CCAAGATCCT GGTTGAAAGC
TGCACCGACA TTGCCAACGA ACTGTACCTG GGTGCCGTAG TTGACCGCGC TACCCGTCGC
GTAGTGTTCA TGGCTTCTAC CGAAGGTGGT GTGGAAATCG AAAAAGTGGC TGAAGAGACT
CCTGAGCTCA TTCACAAAGC CATCATCGAT CCTATCGCCG GTCCACAGCC TTTCCAGGCT
CGTGACCTTG GCTTCAAGCT GGGTCTGAAC CCAACTCAAA TGAAGCAGTT CACCAAGATA
TTCATGGGCC TGGCCCAGAT GTTCCTGGAT CACGACTTCG CTCTGCTGGA AATCAACCCA
CTGGTAATCA CTACCGAGGG TAACCTGCAC TGCCTGGACG GCAAGATTGG TGTAGATGGT
AACGCTCTGT TCCGTCAGCC AAAAATCAAA GACATGCACG ATCCTTCTCA GGATGACGCC
CGTGAAGCCC ACGCTGCCAA GTTCGAACTG AACTACGTAG CTCTGGACGG TAACGTAGGC
TGCATGGTGA ACGGTGCTGG TCTCGCCATG GGTACCATGG ACATCGTAAA CCTGCACGGC
GGTAAGCCAG CCAACTTCCT CGACGTAGGT GGCGGCGCGA CCAAAGAGCG CGTTTCCGAA
GCGTTCAAGA TCATTCTGTC TGACAGCAAT GTGAAAGCCG TTCTGGTTAA CATCTTCGGT
GGTATCGTGC GTTGTGACAT GATCGCCGAA GGTATCATCG GTGCGGTGAA AGAAGTAGGC
GTGAAGGTGC CTGTAGTTGT GCGTCTGGAA GGTACCAACG CTGAACTGGG TGCCAAGGTG
CTGGCTGAAT CTGGTCTGGA CATCATTGCT GCCAAGAGCC TGACCGACGC TGCTCAGCAA
GTTGTTAAAG CTGCGGAGGG CAAGTAA
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| Protein sequence | MNLHEYQAKA LFAEYGLPVS EGYACDTPQE AVEAAGRIGG NMWVVKCQVH AGGRGKAGGV
KVTGDKEEIR AFAEKWLGKN LVTYQTDENG QPVAKILVES CTDIANELYL GAVVDRATRR
VVFMASTEGG VEIEKVAEET PELIHKAIID PIAGPQPFQA RDLGFKLGLN PTQMKQFTKI
FMGLAQMFLD HDFALLEINP LVITTEGNLH CLDGKIGVDG NALFRQPKIK DMHDPSQDDA
REAHAAKFEL NYVALDGNVG CMVNGAGLAM GTMDIVNLHG GKPANFLDVG GGATKERVSE
AFKIILSDSN VKAVLVNIFG GIVRCDMIAE GIIGAVKEVG VKVPVVVRLE GTNAELGAKV
LAESGLDIIA AKSLTDAAQQ VVKAAEGK
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