| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1427 |
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| Symbol | sucA |
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| ID | 4603679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1736522 |
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| End bp | 1739344 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780777 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_927304 |
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| Protein GI | 119774564 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.345596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCAAG GCAGCATGAA AGCCTGGCTG GAGTCATCTC ACCTGTACGG ATCGAACGCG
ACCTATGTGG AGGAGATGTA CGAAGCCTAT CAAGAAGACC CCACTTCAGT GTCCGATGAC
TGGCGTGCGG TGTTTGACAA TCTCCCTCCC GTGAACGGTG CCTCTGCTGA TGTACCTGAA
GCTTCTCACT CCAAGATCCG TGATTATTTC CGCTCCCTGG CCCAGGAAGG CCAACGTAAA
GGCGCCGGTC GTGTAACCGA CCCCGAAGTG GATGCCAAAC AGGTTAAGGT ACTGCAACTG
ATTAACGCTT ACCGTTTCCG TGGTCACCAG AATGCGAATC TGGACCCGCT GGAACTGTGG
AAGCGTGACG CAGTGGTTGA ACTTGACCCG GCGTTCCACG GCCTGACCGC CGATGATATG
CAGCGTGAAT TCAACACCGG TTCATTCGCC TACGGTGGCG AAACCCTGAA ACTGGGTGAG
CTGGTAAAAG CATTGAAGGC CACCTATTGT GGTTCCATCG GTGCCGAGTA CATGCACATC
ACCGACACCG ACGAAAAACG CTGGATCCAG CAGCGCCTCG AACCTTCCAT GGGTCGCGCC
GCATTCGATA AAGGTGTTAA AACCCGTATT CTTGAAGGGC TGAACGCCGC CGAAGGTATG
GAAAAGTACC TGGGTGCCAA GTTCCCCGGT GCCAAGCGCT TCTCTTTGGA AGGTGGCGAT
GCACTGGTGC CCATGATGCG TGAAATCATC TATCGCGCCG GTGAAGCCGG TACCAAGGAG
ATCGTGGTGG GCATGGCTCA CCGTGGCCGT CTGAACGTAC TGGTTAACGT ACTGGGTAAG
CGTCCTGCTG AGCTGTTTGA CGAGTTTGCC GGTAAACATG CCGAAAGCTC AGGCTCAGGT
GACGTGAAGT ACCATCAGGG CTTCTCCTCT GATTTCGAAA CTCCCGGTGG TAACGTACAC
CTGGCGCTGG CATTCAACCC ATCGCACCTG GAAATCGTTA ACCCTGTGGT AATGGGGTCA
GTTCGCGCCC GTCAGGACCG CCGTGGCTGT AAAGATGGTC TGTCAGTGAT GCCTATCACC
ATTCACGGTG ACTCGGCGAT TGCAGGGCAG GGCATTGTGC AGGAGACATT CAACATGTCT
CAGACCCGCG GTTTCCGTGT GGGCGGCTCT ATCCGCATCG TTGTGAACAA CCAGGTGGGC
TTCACCACCT CTAACCACCA TGACGTGCGT TCTACCGAGT ACTGTACCGA CATCGCCAAG
ATGGTTCAGG CGCCGATTTT CCACGTGAAC GCCGACGATC CTGAAGCCGT GGCCTTCGTG
GCTCAGGTTG CCGTTGATTA CCGTAACGCC TTCAAGCGTG ACGTGGTCAT TGACCTTGTG
TGTTACCGTC GTCATGGTCA CAACGAAGCT GACGAGCCAA GTGCCACTCA GCCGCTGATG
TATCAGAAGA TCAAGAAGCA CCCAACCCCA CGTAAAATCT ACGCCGATCG CCTGATTGCC
GAAAACGCCG TCAGTGCCGA TGACGTGACC GCCATGATCA ATGGCTACCG TGATGCCCTG
GATCAGGGTG ACTGTGTAGT GAAAGAATGG CGTCCCATGT CACTGCGTAC CGTCGACTGG
TCTCCATTCA TCGGTCAGGA CTGGGATGTG TCTTACGAGC CAACCGTGGC GCTGGCACGT
TTGCAAAAAC TGGCTGAGAA GCTGGCGTAT GTGCCTGAAA CCCATCCGCT GCAGTCTCGC
GTTGCCAAGA TTTACGCAGA CCGCGTGGCC ATGGCCAAGG GCGAGAAGCT GCTGGACTGG
GGTTTTGCCG AGACTTTGGC TTACGCCACT ATCCTGGAAG ACAACAACCG CGTGCGCATC
ACAGGTCAGG ACTCTGGCCG TGGTACCTTC TTCCACCGTC ACGCGGTTCT GCACAACCAG
AACGATGCCA CCACCTATAT GCCGCTGCGT AACCTTGCGC AGGAGCAGGG TCCGGTTGAC
ATTACTGACT CTGTGCTGTC AGAAGCCTCT GTACTGGCAT TCGAATACGG TTATGCCACT
GCCGAGCCAG GCGGCCTGAC CATTTGGGAA GCTCAGTTTG GTGACTTTGC CAACTGTGCC
CAGGTAGTGA TTGACCAGTT CCTGTCCTCC GGTGAGCAAA AGTGGGGCCG TCTGTGCGGT
CTGACCATGC TGTTGCCACA TGGCTACGAA GGTCAGGGCC CAGAGCACTC TTCAGCCCGT
CTGGAACGTT TCCTGCAACT GTGCGCCAAC CACAACATGC AAGTGTGTGT GCCTTCGACC
CCGGCTCAGG TTTATCATAT GCTGCGCCGT CAGGTAGTTC GCCCACTGCG TCGTCCTCTG
GTGGTCATGT CGCCCAAATC TTTGCTGCGT CACCCTTTGG CCGTGTCTTC TCTGGAAGAA
CTGGCAAACG GTACCTTCCA GAACGTGATC GGCGAAATCG ACAGCCTGGA TCCGAAAGCC
GTTAACCGCG TTGTGTTCTG TAGCGGTAAG GTGTACTTCG AGCTGCTGGA GCGTCGCCGT
AAGGAAAACC TCACCAACGT TGCTATTATT CGTGTCGAGC AGCTGTATCC GTTCCCTGCC
GAAGAGATGG CAGCGATACT TGCCGAATAT CAGCACGTGA CTGACTTCGT ATGGTGTCAG
GAAGAGCCGC AGAACCAGGG TGCCTGGTAT TGCAGTCAGC ACCACTTCTG GGCCGCAATT
CCCAAGGGTG CCACTCTGAC CTACGCTGGC CGTGAAGCTG CTGCTGCACC GGCCTGTGGC
TACCCAGAAT TGCACGCTCA CCAGCAGGAA TCTCTGGTGG TAGACGCTTT GAACTTGAAG
TAA
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| Protein sequence | MHQGSMKAWL ESSHLYGSNA TYVEEMYEAY QEDPTSVSDD WRAVFDNLPP VNGASADVPE
ASHSKIRDYF RSLAQEGQRK GAGRVTDPEV DAKQVKVLQL INAYRFRGHQ NANLDPLELW
KRDAVVELDP AFHGLTADDM QREFNTGSFA YGGETLKLGE LVKALKATYC GSIGAEYMHI
TDTDEKRWIQ QRLEPSMGRA AFDKGVKTRI LEGLNAAEGM EKYLGAKFPG AKRFSLEGGD
ALVPMMREII YRAGEAGTKE IVVGMAHRGR LNVLVNVLGK RPAELFDEFA GKHAESSGSG
DVKYHQGFSS DFETPGGNVH LALAFNPSHL EIVNPVVMGS VRARQDRRGC KDGLSVMPIT
IHGDSAIAGQ GIVQETFNMS QTRGFRVGGS IRIVVNNQVG FTTSNHHDVR STEYCTDIAK
MVQAPIFHVN ADDPEAVAFV AQVAVDYRNA FKRDVVIDLV CYRRHGHNEA DEPSATQPLM
YQKIKKHPTP RKIYADRLIA ENAVSADDVT AMINGYRDAL DQGDCVVKEW RPMSLRTVDW
SPFIGQDWDV SYEPTVALAR LQKLAEKLAY VPETHPLQSR VAKIYADRVA MAKGEKLLDW
GFAETLAYAT ILEDNNRVRI TGQDSGRGTF FHRHAVLHNQ NDATTYMPLR NLAQEQGPVD
ITDSVLSEAS VLAFEYGYAT AEPGGLTIWE AQFGDFANCA QVVIDQFLSS GEQKWGRLCG
LTMLLPHGYE GQGPEHSSAR LERFLQLCAN HNMQVCVPST PAQVYHMLRR QVVRPLRRPL
VVMSPKSLLR HPLAVSSLEE LANGTFQNVI GEIDSLDPKA VNRVVFCSGK VYFELLERRR
KENLTNVAII RVEQLYPFPA EEMAAILAEY QHVTDFVWCQ EEPQNQGAWY CSQHHFWAAI
PKGATLTYAG REAAAAPACG YPELHAHQQE SLVVDALNLK
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