| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1426 |
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| Symbol | sdhB |
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| ID | 4603678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1735622 |
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| End bp | 1736329 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780776 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_927303 |
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| Protein GI | 119774563 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0151573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGTTGG AGTTTTCAGT TTATCGTTAC AATCCTGACG TAGATACCAA GCCACGTATG
CAGGATTACA GCTTCGACGT GCCTGATGGC TCAGACATGA TGGTGCTTGA TGCGCTGCTG
AAGCTGAAAG AAATCGATCC GACACTGTCG TTCCGCCGTT CATGCCGTGA AGGTGTGTGT
GGTTCTGACG GTATGAACAT GAATGGTAAG AACGGCCTGG CTTGTATCAC GCCTATCTCT
ACCTTCAAGG GCAAGAAGAT TGAAATCCGC CCACTGCCCG GTATGCCCGT GGTACGTGAC
CTGGTGGTCG ATCTTTCCCA GTTCTACAAG CAGTACGAGA AGATCAAGCC ATACCTCATC
AACGATGAGA AGAAGCCTGC CCGTGAACAC CTGCAGAGCC CTGAGGAGCG TGCGCACCTC
GACGGTCTGT ATGAATGTAT CATGTGCGCC TGCTGCTCGA CCGCCTGTCC ATCGTTCTGG
TGGAACCCCG ACAAGTTCGT GGGGCCAAGT GGTTTGCTGC ATGCCTATCG CTTCCTTATC
GACAGCCGCG ATACTGCGAC TGAAGAGCGT CTGGCCGAGC TTGACGACGC CTACAGCGTG
TTCCGTTGCC ACGGCATCAT GAACTGCGTA GACGTGTGTC CGAAAGGACT GAACCCGACC
AAGGCGATTG GACACATCAA GTCCATGCTG CTGAAGCGGG CCGTGTAA
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| Protein sequence | MKLEFSVYRY NPDVDTKPRM QDYSFDVPDG SDMMVLDALL KLKEIDPTLS FRRSCREGVC
GSDGMNMNGK NGLACITPIS TFKGKKIEIR PLPGMPVVRD LVVDLSQFYK QYEKIKPYLI
NDEKKPAREH LQSPEERAHL DGLYECIMCA CCSTACPSFW WNPDKFVGPS GLLHAYRFLI
DSRDTATEER LAELDDAYSV FRCHGIMNCV DVCPKGLNPT KAIGHIKSML LKRAV
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