| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1422 |
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| Symbol | gltA |
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| ID | 4603674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1731406 |
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| End bp | 1732692 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780772 |
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| Product | type II citrate synthase |
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| Protein accession | YP_927299 |
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| Protein GI | 119774559 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000689188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATT TGAAAGCCAA ATTGGAATTA CCGGGGAACG ATTCAATTGA ACTGCCGGTT
AAACAGGGCA CCGAAGGTTT CGATGTTATC GATATCAGCA AGCTGGGCAG CAAAGGTTAT
TTCACCTTTG ATCCAGGGTT TCTGGCCACA GCTTCCTGTG AATCAGCAAT TACCTATATC
GACGGCGACA AGGGTATTTT GCTGCACCGT GGCTACCCCA TCGAGCAGCT GGCAGTAGAA
TCCAACTATC TGGAACTCTG CTACGCCCTC CTGTACGGCG AACTGCCGAC TAAAGCGCAA
TACGAACAAT TTGCCCACAC TGTGAAGAGC CACACCATGG TTCACGAGCA GTTGGCATTC
TTCTTCCGCG GCTTCCGTCG CGATGCACAC CCCATGGCCA TGCTATGCGG TGTGACCGGT
GCACTGTCTG CTTTCTACCA GGACTCTCTG GATGTAAACG ACGCCCGTCA CCGTGAAATT
GCCGCCTATC GTCTGGTATC CAAGATGCCG ACGCTGGCAG CCATGTGCTA CAAGTATTCC
ATCGGCCAGC CATTCGTGTA CCCACGTAAT GACTTGAGCT ACGCCGGTAA CTTCCTGTCG
ATGATGTTTG CCGTACCTTG CGAAGAGTAC AAGGTAAACC CAATCATCGA GCGCGCCATG
GATCGCATCT TCATCCTGCA CGCTGATCAC GAACAGAATG CCTCTACTTC TACTGTGCGT
CTGGCCGGCT CTTCCGGTGC CAACCCATTC GCCTGTATCG CAGCCGGTAT TGCGTCTCTG
TGGGGTCCTG CCCACGGTGG TGCCAACGAA GCCTGTCTGC GCATGCTGGA AGAAATCGGT
ACTGTTGACC GTATTCCTGA GTTTATCGAC CGCGCCAAGG ACAAGAATGA TCCATTCCGT
CTGATGGGCT TCGGTCACCG CGTGTACAAG AACTTTGACC CACGTGCCAA GGTAATGCGT
GAAACCTGCC ACGAAGTGCT GAGCGAGCTC AAGGTGAACG ACCCTCTGCT GGACGTTGCC
ATGGAGCTCG AGCGTATTGC CCTCAATGAT GAGTACTTTA TCTCCAAGAA GCTCTACCCG
AACGTAGACT TCTACTCAGG TATCATCATG AAGGCCATTG GCATTCCAAC CAGCATGTTC
ACCGTGATTT TTGCTCTGGC CCGCACCGTT GGCTGGATCT CTCACTGGAA AGAAATGCTG
GATCAGCCTG GTCACAAGAT CAGTCGCCCA CGTCAGCTGT ACACCGGCGA ACACAGCCGC
GATTTTGTCA GTGTCGATAA GCGATAA
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| Protein sequence | MADLKAKLEL PGNDSIELPV KQGTEGFDVI DISKLGSKGY FTFDPGFLAT ASCESAITYI
DGDKGILLHR GYPIEQLAVE SNYLELCYAL LYGELPTKAQ YEQFAHTVKS HTMVHEQLAF
FFRGFRRDAH PMAMLCGVTG ALSAFYQDSL DVNDARHREI AAYRLVSKMP TLAAMCYKYS
IGQPFVYPRN DLSYAGNFLS MMFAVPCEEY KVNPIIERAM DRIFILHADH EQNASTSTVR
LAGSSGANPF ACIAAGIASL WGPAHGGANE ACLRMLEEIG TVDRIPEFID RAKDKNDPFR
LMGFGHRVYK NFDPRAKVMR ETCHEVLSEL KVNDPLLDVA MELERIALND EYFISKKLYP
NVDFYSGIIM KAIGIPTSMF TVIFALARTV GWISHWKEML DQPGHKISRP RQLYTGEHSR
DFVSVDKR
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