| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1411 |
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| Symbol | |
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| ID | 4603663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1714385 |
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| End bp | 1715095 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639780761 |
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| Product | transcriptional regulator PhoU |
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| Protein accession | YP_927288 |
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| Protein GI | 119774548 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0704] Phosphate uptake regulator |
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| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.816456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0228624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATAAAC TGAGTACCAA TAAGCACATT TCCGGTCAGT TCAATGCCGA GCTGGACGAC
ATCCGTAACC GGGTTCTGGC CATGGGTGGT CTGGTAGAGC GTCAGCTGGA GCAGGCACTG
GATGCCCTCG GTGGCTTGGA TGCCGAGCTC GCCAAGCGCG TGATCGATGG CGACCACAAG
GTCAACGGCA TGGAGGTGTC CATCGACGAA GAGTGCACCC GTATCATTGC CAAGCGTCAG
CCCGCGGCGA GCGATCTGCG TCTCATCATT GCCATCTCCA AGACCATTGC CGACCTTGAA
CGTATCGGTG ATGCCTCGGT GCGTATTGCC AAGGCCGCAC TGGAGAAGCG TAACAACAAC
CAGCAACCGC TGCTGGTGAG CATTGAGTCC ATGGGACGCC ATGCCACCCG CATGCTGCAT
TCCACGCTGG ATGCGCTGGC GCGGATGGAT GTGGAGTCGG CCCTGGAGCT GCACCGAGAA
GATGCCCGTC TGGATAAGGA GTACGAGGGC ATCATTCGTC AGCTGATGAC CTACATGATG
GAAGACCCCC GTTCAATTCC GGGAGTACTG GATGTGCTCT GGGCCGCCCG CGCGGTGGAG
AGAGTAGGGG ACCGCTGTAA GAACATCTGC GAGTACATCA TCTACTACGT GAAGGGCAAG
GATGTGCGCC ATACCTCCTA CGAGGACATG GAAAAAGACA TTAACCTCTG A
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| Protein sequence | MDKLSTNKHI SGQFNAELDD IRNRVLAMGG LVERQLEQAL DALGGLDAEL AKRVIDGDHK
VNGMEVSIDE ECTRIIAKRQ PAASDLRLII AISKTIADLE RIGDASVRIA KAALEKRNNN
QQPLLVSIES MGRHATRMLH STLDALARMD VESALELHRE DARLDKEYEG IIRQLMTYMM
EDPRSIPGVL DVLWAARAVE RVGDRCKNIC EYIIYYVKGK DVRHTSYEDM EKDINL
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