| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1406 |
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| Symbol | |
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| ID | 4603658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1707878 |
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| End bp | 1708816 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780756 |
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| Product | hypothetical protein |
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| Protein accession | YP_927283 |
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| Protein GI | 119774543 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0365604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0466705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTGAATC TGTTTGTGGA TATTGAGTGC CGGGGGGAGA AATTGGCCAA TCTGATGTTA
TTGTTGGCGG CGGCTATTTG GGGCTTTGGC TTTGTGGCGC AGCGATTGGG AATGGAAAGC
CTTGAGCCTT TTGCATTCAA TGGGTTGCGT TTTGTTATCG GCGCGATGAG TCTGCTGCCA
TTGATTTGGT TTTTAAAGAC TAAAGGCCGG GTAAAAGGGG CGGGTGAGAC TGGTTTTTGG
CGCCGGGCGC TGGTCGGTTC CCTTGGCTGT GGTGGCATTT TGTTTATCGC AGCATCGTTT
CAGCAGGTTG GGCTGCTGCA TACCACCGCA GCCAACGCCG GATTTATCAC GGGCCTTTAT
ATCGTGCTGG TGCCGGTACT GGGGATCATG CTGAAGCACA GTACGGGTCT CAATACCTGG
CTTGGCTGCG CCATTGCTGT GGTGGGGTTG TATTTTTTAA GTGTGGGTGA GGATTTCAGT
ATCTCCTTTG GTGATGGTCT GCAGCTTGTC GGCGCACTCT TTTGGGCCAT GCATATACTG
GCAGTGGATC ACTACGCCAC CCGCATAGCG CCTGTGGTGC TGGCCTGTGG CCAATTCCTG
GTGTGCGCGC TGGCAAGTTT TGTGGTGTCC TTAATGATGG AAACCACCAC GCTGGCCGGT
GTGCAGGCAG CCTGGGGATC ACTGGCCTAC GCAGGCCTTA TCTCGGTGGG AGTCGCGTAT
ACCCTGCAGG TGCTGGCGCA AAAACATGCC CATCCTGCCC ACGCCGCCAT TATTTTGAGT
CTTGAAACCG TATTTGCCGC CATTGGCGGT ATGCTGTTTC TCGATGAAAC GTTGGGGCCG
AGGGCCTTGT TTGGCTGCGG ACTGATGCTC TTTGGTATGC TGATCAGCCA GATACCCTTA
AGGTATCTGG TGAAATCAAG GCACCAAAAG GTGACCTAG
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| Protein sequence | MLNLFVDIEC RGEKLANLML LLAAAIWGFG FVAQRLGMES LEPFAFNGLR FVIGAMSLLP
LIWFLKTKGR VKGAGETGFW RRALVGSLGC GGILFIAASF QQVGLLHTTA ANAGFITGLY
IVLVPVLGIM LKHSTGLNTW LGCAIAVVGL YFLSVGEDFS ISFGDGLQLV GALFWAMHIL
AVDHYATRIA PVVLACGQFL VCALASFVVS LMMETTTLAG VQAAWGSLAY AGLISVGVAY
TLQVLAQKHA HPAHAAIILS LETVFAAIGG MLFLDETLGP RALFGCGLML FGMLISQIPL
RYLVKSRHQK VT
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