| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1404 |
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| Symbol | |
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| ID | 4603656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1704037 |
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| End bp | 1706616 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639780754 |
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| Product | beta-glucosidase |
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| Protein accession | YP_927281 |
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| Protein GI | 119774541 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0412304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0264446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTG CACTATCCAA AACTACGCTG GCCCTTGCCT GTGTCCTTGG TGGCGTCATG
TCAGGCAAGG TGAGCGCAGC AGAATCCTCA TCGCTGACCG AGCGGGATGT TAATCGCTGG
CCAGAGGCCG TTTACCATAC CCCAATTCAG GCGGATGTTG AGGCAAAGGT TCATAAGCTG
CTGGCCGCAA TGACACTTGA GCAAAAAGTG GCGCAAATTA TCCAGCCGGA AATTCGCGAC
TTTGGCGTTG AGGATATGCG TCGTTATGGC TTTGGCTCCT TCCTCAATGG TGGCGGTTCA
TTCCCCGGTA ATAATAACAG GGCAAAGGCG GCCGATTGGG TGGCGCTGGC AGACCAGATG
TACCACGCCG CCATGGATGA CAGTATCGAT GGAATTGCCA TTCCGCCCAT GTGGGGCACA
GATGCCGTTC ACGGTCATGG CAATGTGTTT GGCGCCACCT TGTTCCCCCA TAACATTGGC
TTGGGTGCAA CGCAAAACCC CCAGCTGATT AAAGCCATCG CGGCGGCCAC GGCCAAAGAA
GTGCGCGCAA CCGGGATCGA CTGGGTGTTT GCGCCTACCG TTGCTCTGGT GGATAACCTG
CGCTGGGGTC GAACTTATGA AGGCTATGCC CGGGATCCTG AGCTGATTGA ACGCTACGCC
GAGGCCTTTG TCGATGGCAT GCAGGGCGAG GGCAAAAGTT GGCTGGGTGA CGATTACACC
CTGGCCACTG CCAAACACTT TATCGGCGAT GGCGGCACTG ATAATGGTGA CGATCGCGGT
GACACCAGGG TAGATGAAAA CACTCTGATA GCCCGCCATG GTCAGGGTTA CGTGGGTGCA
CTGGGTCATG GCGTGCAAAC CGTGATGGCC TCTTTTAACA GTTGGAACGG CGAAAAGCTC
CACGGCAGCA AATACCTGCT CACCGATGTG CTCAAAGAGC GCATGGGATT TGATGGGGTT
GTGGTTGGCG ATTGGCTCGG CCATGGCTTT GTACCGGGCT GCAGTTACGA GCACTGCGCT
GAAGCCGTGA ATGCCGGGGT GGACATACTG ATGGCCCCGG GGGACAGCTG GAAAGCACTG
TACGCCAATA CCATCGCGGA TGTGAAATCC GGGGTCTTGC CGCTTTCCCG TCTTGATGAT
GCGGTGAAGC GCGTGTTGCG GGTAAAGCTG CGTGCGGGTC TGTTTGATAA CAAGGCGCCG
TCAGCGAACC CCTATGCCGG TAAACAGGAA TGGATAGGGC ATCCAGAGCA CCGCGCCATT
GCCCGTCAGG CGGTTGCCGA GTCTTTGGTG CTGCTCAAAA ACAACCGCCC AGCCAATGGG
GCGCGCCCTG TGCTGCCCAT TGCCGCCAAT GCCAGGGTCT TGGTGGTGGG CGAAGGCGCT
GACAGCATTC CACAGCAGTC GGGTGGTTGG AGCATGACCT GGCAGGGGAC CGAAGTCACC
AATGCGGACT TCCCCGGTGC CACCAGTATT TTTGCCGGCA TCAAGGCAGC GCTGAACGCC
GCTGGCGGTG ATGCTCTCCT GAGCTCCGAT GGCACTATCC CCGTGGGATT CAAACCCGAT
GTGGTGATAG CCGTCTATGG TGAGCAACCC TACGCCGAAG GCAACGGCGA TTTGGATAAC
CTCGAGTATC AGCGCGGTGA CAAGCGTTCT CTGGCCATGC TCAGCGCACT GAAGGCAACC
GGATTACCCC TGGTGTCCGT GGTTTTGTCC GGCAGACCCC TGTGGATGAA CCCTGAAATC
AACGTATCGG ATGCCTTTGT GGCCGCCTGG CTGCCCGGCA GCGAAGGTGC GGGTGTGGCA
GATGTGCTGA TTGGCGATAA AAACGCTCAG CCCCGAGCCG ATTTCAAGGG GCGCATGCCA
TTCCCATGGC CCGCCACTCC ATCAGCCGAT GGTTTTGTGT CTGATACGGG CAGTGCAGGG
CAAGACCAGC CCAAGCCCCT GTTCAGCCTC TGGCAGGGCT TTGATTATCG GTCTGATGCC
ACGCTTGCCG CACTCAGCGA GGACAACGGC AGCTCGGAGG CAGACAACCG ACTGGCGATT
TTCGATAAAG CCATCAAGGC GCCCTGGCAT TTGGCGGTAG GAGACGATAA GGGACTGCAC
CGTGTTGGTC CCGGTCTTTG GCAGCAGGGT CCATGGGCCG TGCGCAGTGT GAATCGCATT
GTGCAGGAAG ATGCCCGCCG GTTTGAGTTC GGCGCCGCCG GTACCCTCAG CTTCCGTGAT
GATTTTACTT TGGACTTGCG CCGCTTTGCG CCCGACTCAT CACTGCTTTC TTTCGATATT
GCCCTGACGG CCTTGCCCGG AAAGTTGCAA CTGTCGATGG TCTGTGAAGG CGGCTGTCGT
CAAGCCGTGG AGTTGTCCGG GCAGTTAAAA GCCGATGGTC AGTGGCAGCG TGTTGAAGTG
CCGCTGTCAT GTTTCGGAGT AACGGCTGAT GAGCTGGCAC GCACTTTCAG CCCCATGACC
ATGTCACTTC CTCAGGGGGG CACCCTGACG CTGGCGAATG TCAGCCTCGA AGGAATGGTC
CAACGGGATG CGTCTGCCAA GGCAGTGGAA TGTGGATTGC CGCCGGTCAG CGACAAATGA
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| Protein sequence | MKFALSKTTL ALACVLGGVM SGKVSAAESS SLTERDVNRW PEAVYHTPIQ ADVEAKVHKL
LAAMTLEQKV AQIIQPEIRD FGVEDMRRYG FGSFLNGGGS FPGNNNRAKA ADWVALADQM
YHAAMDDSID GIAIPPMWGT DAVHGHGNVF GATLFPHNIG LGATQNPQLI KAIAAATAKE
VRATGIDWVF APTVALVDNL RWGRTYEGYA RDPELIERYA EAFVDGMQGE GKSWLGDDYT
LATAKHFIGD GGTDNGDDRG DTRVDENTLI ARHGQGYVGA LGHGVQTVMA SFNSWNGEKL
HGSKYLLTDV LKERMGFDGV VVGDWLGHGF VPGCSYEHCA EAVNAGVDIL MAPGDSWKAL
YANTIADVKS GVLPLSRLDD AVKRVLRVKL RAGLFDNKAP SANPYAGKQE WIGHPEHRAI
ARQAVAESLV LLKNNRPANG ARPVLPIAAN ARVLVVGEGA DSIPQQSGGW SMTWQGTEVT
NADFPGATSI FAGIKAALNA AGGDALLSSD GTIPVGFKPD VVIAVYGEQP YAEGNGDLDN
LEYQRGDKRS LAMLSALKAT GLPLVSVVLS GRPLWMNPEI NVSDAFVAAW LPGSEGAGVA
DVLIGDKNAQ PRADFKGRMP FPWPATPSAD GFVSDTGSAG QDQPKPLFSL WQGFDYRSDA
TLAALSEDNG SSEADNRLAI FDKAIKAPWH LAVGDDKGLH RVGPGLWQQG PWAVRSVNRI
VQEDARRFEF GAAGTLSFRD DFTLDLRRFA PDSSLLSFDI ALTALPGKLQ LSMVCEGGCR
QAVELSGQLK ADGQWQRVEV PLSCFGVTAD ELARTFSPMT MSLPQGGTLT LANVSLEGMV
QRDASAKAVE CGLPPVSDK
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