| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1403 |
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| Symbol | |
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| ID | 4603655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1702793 |
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| End bp | 1704040 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780753 |
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| Product | glucose/galactose transporter |
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| Protein accession | YP_927280 |
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| Protein GI | 119774540 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000325262 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0455356 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTG TACCTATTGC CAACGCTAAT CACGCAGGCG CTGCCGGCGC AGAGAACTAT
CGTTTTGCGC TCGGCTCACT CACCACATTG TTTTTTATGT GGGGTTTTAT CACCTGTCTT
AACGACATCC TTATTCCGCA TCTGAAAGCC GTCTTCAGCC TGAACTATGC CCAGGCGATG
TTAATTCAGT TTTGTTTCTT TGGTGCCTAT TTTCTGGTGT CGGTACCGGC TGGTGTCCTG
GTCAAACGTC TCGGCTACCA AAAGGGCATA GTGGTTGGCT TGTTAACCGC AGCGCTGGGC
TGTGGTCTCT TTTATCCGGC GGCGGTATCG GCCACGTATG GCGTGTTTTT GGGGGCACTC
TTTGTGCTTG CCAGCGGCAT TACCGTGCTG CAGGTGGCGG CCAATCCCTA TGTGACGGCG
CTGGGACCGG TGCAAACAGC CTCAAGCCGT CTGACCCTGA CCCAGGCGTT TAACTCCCTG
GGTACCACCA TAGCCCCGGC CTTTGGCTCT GTGCTTATCC TGTCGGTGGC CGTTGGCGCC
TCTGCCGAGG CCGAAGCCGA TGCGGTCAAG CTGCCCTATC TGCTGCTGTG TGGCATGTTG
ATTGTGCTGG CGGTGGTGTT TGCACTGCTG AAATTGCCCC ATATCCATGA CCAGGAAGAT
GAGGTGGCCG CGACTGGCCA GAGCGCGCTT GCCCATCGCC ATCTGGTGCT CGGCGCCATA
GGCATATTCG TTTATGTGGG CGGTGAAGTG GCCATTGGCA GCTTTTTGGT GAACTTTTTG
GGTGAATCCC ATGTGGCGGG CATGGCCGAG GCCGATGCAG CCCATTACAT CGCCTTTTAC
TGGGGCGGTG CCATGGTGGG GCGTTTTATC GGTGCGGCCG TGATGCAAAA AGTGGATGCC
GGCAAGGTGC TGGGATTCAA TGCCACCATG GCGGCCCTGC TGGTACTGGT TGCCATGAAC
AGCAGCGGCG CCCTGGCCAT GTGGGCGATT CTGGCGGTGG GGCTGTTTAA CTCCATTATG
TTTCCGACCA TCTTCAGTCT GGCGCTGAAA AACCTGGGCC CGGCGACAGC CCAGGGCTCG
GGTATTCTGT GTCTGGCGAT TGTGGGTGGC GCCCTGGTGC CTTTGCTGCA GGGGCTTCTG
GCTGATTCTG TTGGCTTGTC TGCCTCATTC ATTCTGCCGG TGCTCTGCTA CGGCTACATC
CTCTTTTATG GCCTGAAGGG CTCTGTACCC CGGGAGGCTG GTCAATGA
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| Protein sequence | MATVPIANAN HAGAAGAENY RFALGSLTTL FFMWGFITCL NDILIPHLKA VFSLNYAQAM
LIQFCFFGAY FLVSVPAGVL VKRLGYQKGI VVGLLTAALG CGLFYPAAVS ATYGVFLGAL
FVLASGITVL QVAANPYVTA LGPVQTASSR LTLTQAFNSL GTTIAPAFGS VLILSVAVGA
SAEAEADAVK LPYLLLCGML IVLAVVFALL KLPHIHDQED EVAATGQSAL AHRHLVLGAI
GIFVYVGGEV AIGSFLVNFL GESHVAGMAE ADAAHYIAFY WGGAMVGRFI GAAVMQKVDA
GKVLGFNATM AALLVLVAMN SSGALAMWAI LAVGLFNSIM FPTIFSLALK NLGPATAQGS
GILCLAIVGG ALVPLLQGLL ADSVGLSASF ILPVLCYGYI LFYGLKGSVP REAGQ
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