Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1396 |
Symbol | |
ID | 4603648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1688784 |
End bp | 1691438 |
Gene Length | 2655 bp |
Protein Length | 884 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639780746 |
Product | glucan endo-1,3-beta-D-glucosidase |
Protein accession | YP_927273 |
Protein GI | 119774533 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000905888 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0353451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGATGA AGAATTCTGG AACGAGCAAG TACCTTTCCC TTGGACTGCT TGCGGCGGCG CTGCAGGGGT GCGGGGGGGA TACCAATACC AGCACCGATT TGGGCTCGGT CAACCTTGAA GGTCCGGCAA CCGGTTGGGA GCTGGTGTGG AGCGACGAGT TTGACGGCAG CAGCATAGAC GCGGCCAAGT GGGCGCATGA CGTGGATTGT GCCGGAGGCG GAAATCAGGA GTCTCAATGC TATACCGCAG ATGAAGCTAA CTCCTTCGTT GCCGATGGTA TGCTGAACAT AGTGGCGCTG AAGGCGCCCG AGGGTGCTGA AAAGCCTTAT ACCTCAGCAA GACTGACAAC CAAAGGCAAG GCGGATTTCA CTTATGGCCG CTTTGAAATG CGGGCGAAAT TACCGTCGGG GCAGGGCAGC TGGCCTGCCT TCTGGATGCT GCCTACCGAC AATGTCTACG GCATCTGGCC CCGAAGCGGC GAAATCGATA TTGTGGAAGC GGTAAATCTT AAAGCCGCCA CCGTAGAGGG AACCCCTGAA GCCTACGTCC ACGGAACCCT TCACTACGGC CGTGAGTGGC CCAAGAACGA GCAATCAGGC AAAGCCTATC TGCTGCCCAA TGGCGTCAAT CCTGCCGATG ATTTTCATAC CTATGCCATT GAGTGGCAGC AGGGGGAAAT CCGCTGGTAT GTGGACGACT ACCTCTATGC CACTCAGCGG CGCTCCGAAC TGAGGTACAA CTCCAAGGGG CAGGCGGTTG GTCTGGCTCA CAAAGGCTGG TTTACCGAAT ATTACGATCA ATCCAGTGGC GACCTGCAGC TCAGTTGGAC AGATGCGCCA TTTGATGAAA AATTCCATCT CATCGTTAAC TTCGCTGTGG GTGGCAACTG GCCAGCCTCG GTAAACGAAA CCGGTATCGA CGATACCGCC TTTAACGAGA ACAACAGGTA TCAAATTGAC TTTGTCAGGG TTTATGAATG TGCTGCCAAC CCTGATACCG GCAAGGGCTG TGAGACTGTG CGCCCGGGCT ATGACAACCC AGATGATGCG CTGGTGGAAG GTAAAGCCCC CGTGCCTGTA CCGCCTTCTG ATGGTACGCC AAAAGATCTG CTGATTTTTG ACAGCACCCC CAACCCCAAC TGGGCTGCGT GGGATTGCTG CGGTGGCTCT ACGCCAAGCC TGGTGGAAGA TGCCGACAAG GGCGCCGTAT ATCGCTTTGT GGTAGGCGAC AGCCCAACAG TCAACGGCTT TATCAGCCGC GCGGCCTTTA TTACCGATCC GGCTGGCGTG CCCAGTCCTT TTGATGCAGC GCCCATTGAG GCAAGCGGCG TATTAAGCTT TGCCATGAAG GTGGTGAGTG CCCCGTCAAA TGCAGACTCG ACCTGGATGA TGAAGGTCGA AAGCAACGAA GGTGCGACCG CCGTTGAACT GCCGCTCACC GCAAGCAGTG AAGGTGTGGC ACCGGCAGTG GGCCAGTGGC AAACCTTCAG CTTCCCGCTG TCTGAACTTG CTGCCAAGGG CCTGGACTTG TCTGCCATTG ATGTGGTGAT GGTGTTCCCC GCTTGGGGCA CCGGCAGCGG CGCCGAGTAT CTGTTGGATG AAGTGAAGAT TGCTCGTCCC GATACCAGTT TGCCGTCACT GACCATCTTT ACCGACAACG AGAACCCCGA TTGGCCGATG TGGGACTGCT GTGGTGGCTC GACCCCGCAA GTGGTATCCG ATGATGCAGA GCACGGCATA GTGTCCGAGT TCAGCATTGG TGCCAGCCCG ACGGTGATGG GTTATATCAA TCGCACCGAG CTGGGTGGCG GTGGCAATCC CTTCGATGCC TCATCCCTGT ATGACAATGG CGTAGTGCAA TTTGACCTTA AGGTCGTCAC CGCGCCCAAT ACCGTCGATG CGCCCTGGCT GTTCAAGGTG GAATCCAACA ATGCGGCTTC TGCGGTGGAA CTGCCGTTGA CCAGCAGCGT TGAAGGCATG GCGCCATCCG CGCAGTGGCA AACCTTCAGC TTCCGCCTGT CGACCCTGGC CGATGCGGGA TTGGATTTAA GCGCCATCGA TGTGTTGATG GTATTCCCTG CCTGGGGACA GGGTGAAGGC GCTGTCTATC GCATTGATAA CGTTAAAATC CATCAACCCG GATCCGGCGG CTCCATGAAT GCCCTGAGTC TGTTTGCCGA CACAGTGGCC GATGCCTGGT CAATTTGGGA TTGCTGCGGC GGCTCAACCC CTACGGTTGA GGCCGATGAT GCTGCCCATG GCGCCGTGGC TGAGTATGTG ATTGGCGCCC AGCCAACTGT GGTGGGCTTC TTCGCCGATG ATGGTGTCTA TTACGATGCA TCCGCTGCTG TAGAGACCGG CGTAGTGCGG TTTGAAATGA AGCTGGTTTC TGCACCAAAT GACCCCGGCT CGGTCTGGAA GTTCAAGATT GAATCCGGTG ATGCCAGTAC TGCCGTTGAG CTTAACCTGA CCGACAGTGT CGAAGGCAGT GCACCTGTTG TAGGCCAGTG GCAGACCTAT ACTTTCCCGC TTAAGACCTT GACTGACATG GGGCTGGATG CCAGCGCCAT TGATGTGGTG ATGGTATTCC CTGCGTGGGG TACCGGTGAG GGGGCGGTGT TCCGTTTGGA TAACGCACTG ATAGGCACGC CCTGA
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Protein sequence | MMMKNSGTSK YLSLGLLAAA LQGCGGDTNT STDLGSVNLE GPATGWELVW SDEFDGSSID AAKWAHDVDC AGGGNQESQC YTADEANSFV ADGMLNIVAL KAPEGAEKPY TSARLTTKGK ADFTYGRFEM RAKLPSGQGS WPAFWMLPTD NVYGIWPRSG EIDIVEAVNL KAATVEGTPE AYVHGTLHYG REWPKNEQSG KAYLLPNGVN PADDFHTYAI EWQQGEIRWY VDDYLYATQR RSELRYNSKG QAVGLAHKGW FTEYYDQSSG DLQLSWTDAP FDEKFHLIVN FAVGGNWPAS VNETGIDDTA FNENNRYQID FVRVYECAAN PDTGKGCETV RPGYDNPDDA LVEGKAPVPV PPSDGTPKDL LIFDSTPNPN WAAWDCCGGS TPSLVEDADK GAVYRFVVGD SPTVNGFISR AAFITDPAGV PSPFDAAPIE ASGVLSFAMK VVSAPSNADS TWMMKVESNE GATAVELPLT ASSEGVAPAV GQWQTFSFPL SELAAKGLDL SAIDVVMVFP AWGTGSGAEY LLDEVKIARP DTSLPSLTIF TDNENPDWPM WDCCGGSTPQ VVSDDAEHGI VSEFSIGASP TVMGYINRTE LGGGGNPFDA SSLYDNGVVQ FDLKVVTAPN TVDAPWLFKV ESNNAASAVE LPLTSSVEGM APSAQWQTFS FRLSTLADAG LDLSAIDVLM VFPAWGQGEG AVYRIDNVKI HQPGSGGSMN ALSLFADTVA DAWSIWDCCG GSTPTVEADD AAHGAVAEYV IGAQPTVVGF FADDGVYYDA SAAVETGVVR FEMKLVSAPN DPGSVWKFKI ESGDASTAVE LNLTDSVEGS APVVGQWQTY TFPLKTLTDM GLDASAIDVV MVFPAWGTGE GAVFRLDNAL IGTP
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