| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1386 |
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| Symbol | |
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| ID | 4603638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1677573 |
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| End bp | 1679168 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780736 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_927263 |
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| Protein GI | 119774523 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.65535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0289108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCACAA CCGCCAATAT CACCATGCAG TTCGGCGCCA AGCCACTGTT TGAAAACATC
TCCGTCAAGT TCGGTGACGG CAACCGCTAC GGCCTTATCG GTGCCAATGG TTGCGGTAAA
TCCACCTTTA TGAAGATCCT CGCCGGTGAA CTTGAGCCGT CCGGCGGTAA CGTTCATCTG
GATCCCAACG AGCGTCTGGG TAAGCTGAAT CAGGATCAGT TCGCCTACGA AGAGTTCAGC
GTAATCGATA CCGTTATCAT GGGCCACAAA GAACTGTGGG CTGTTAAGCA GGAACGTGAC
CGTATCTATT CTTTGCCTGA AATGAGTGAA GAAGACGGCA TCAAGGTAGC CGAGCTTGAA
ATGGAATTTG CCGAAATGGA CGGTTACACC GCCGAGAGCC GTGCCGGTGA ACTGCTGCTG
GGTGTGGGTA TTCCTCTGGA GCAACATTTT GGTCCTATGA GCGAAGTGGC CCCAGGCTGG
AAACTGCGTG TGCTGCTGGC ACAGGCACTG TTCTCAGACC CGGACGTGCT TCTGCTTGAC
GAACCAACCA ACAACCTGGA CATCGATACC ATCCGTTGGT TGCAGGACAT GCTGAATCAG
CGTAACAGCA CCATGATTAT CATTTCACAC GACCGTTACT TCCTGAACTC TGTGTGTACC
CACATGGCGG ATCTGGACTA CGGCGAGCTG CGTGTGTATC CGGGCAACTA CGATGAATAC
ATGATGGCAG CCAGCCAGGC CCGTGAGCGT TTGCTGGCCG ACAACGCCAA GAAGAAGGCA
CAGATTGCAG AGCTGCAAAC CTTCGTGGCG CGTTTCTCTG CCAACGCCTC CAAGGCCAAG
CAGGCCACCT CCCGTGCCCG CCAGATTGAC AAGATCAAGC TGGACGAAGT GAAGGCTTCC
AGCCGTGTGA ACCCCTACAT CCGTTTCGAG CAGGAAAAGA AACTGTTCCG TAACGCGCTG
GTGGTAGAGA ACCTGAGCAA GGGCTTCGAT AGCAAGCCGC TGTTCCAAAA CTTCAACATG
ATTGCCGAAG TGGGTGAGCG TATCGCCATC CTCGGTGAGA ACGGTGCCGG TAAAACCACC
CTGGTGCGTA CCCTCATCCA TGAATTGCCA CAGGACGAAG GCACTATTCA CTGGTCTGAG
AATGCCGCTA TCGGTTACTA CGCCCAGGAT CACGCCAGTG ATTTTGAAAA CGATTTGACC
GTATTCGACT GGATGAGCCA GTGGAAGAAA GAAGGCGACG ATGAACAGGC CGTACGCGGT
ATTCTGGGTC GTATGCTGTT TGGCGCCGAC GACATCAGAA AGTCGGTCAA GGTACTGTCG
GGTGGTGAGC AGGGCCGCAT GCTGTTTGGC AAGATGATCA TGCAAAAGCC CAATATCCTG
GTGATGGACG AACCCACTAA CCACCTGGAT ATGGAATCTA TCGAGTCGCT CAACAACGCG
CTGGAAATGT ACGAAGGTAC GCTGTTTTTC GTGTCCCACG ACCGCGCCTT TGTCAGCTCG
CTGGCCAACC GCATTATCGA AATCACCGCC AATGGCGTGA ATGACTTCAA AGGAACTTAC
GACGAGTTCC TGCGCAGTAA AGGCATCGAA GGCTAA
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| Protein sequence | MITTANITMQ FGAKPLFENI SVKFGDGNRY GLIGANGCGK STFMKILAGE LEPSGGNVHL
DPNERLGKLN QDQFAYEEFS VIDTVIMGHK ELWAVKQERD RIYSLPEMSE EDGIKVAELE
MEFAEMDGYT AESRAGELLL GVGIPLEQHF GPMSEVAPGW KLRVLLAQAL FSDPDVLLLD
EPTNNLDIDT IRWLQDMLNQ RNSTMIIISH DRYFLNSVCT HMADLDYGEL RVYPGNYDEY
MMAASQARER LLADNAKKKA QIAELQTFVA RFSANASKAK QATSRARQID KIKLDEVKAS
SRVNPYIRFE QEKKLFRNAL VVENLSKGFD SKPLFQNFNM IAEVGERIAI LGENGAGKTT
LVRTLIHELP QDEGTIHWSE NAAIGYYAQD HASDFENDLT VFDWMSQWKK EGDDEQAVRG
ILGRMLFGAD DIRKSVKVLS GGEQGRMLFG KMIMQKPNIL VMDEPTNHLD MESIESLNNA
LEMYEGTLFF VSHDRAFVSS LANRIIEITA NGVNDFKGTY DEFLRSKGIE G
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